Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00973 ATGATAATCGAAATCTCTCAACTAACCATCGTCTCTCATTCATCCCCTGACCCATTTCCAAAGCCATTGCAAAATCCCCTCTTTAATCTCATAAGACCCTTCTTCACTTCCTTCAATGGCTCTTTACCCTCCACACCCCGCTTCAAATTTTCCCGCCATGCAGGAACCCCTCCTCTCTCAACCTCCGACTCCGGCCTCCGTTTCTGGGAAAAAATCATCTACCTCCAGAAGCTCAATGTTAATCCCCACAAAGCCCTCCGAGAAAACCCCAATTTCCGGTCAGCTCCCATCTCCTCTCTCAAATCCGTAGAGGATTGCCTCTCCTCCATGGGCATCGAGCGCTCTGCCATGGGTCGGATCCTCGACATGCACCCCCAGCTGCTTACCTGCGACCCCCATTACGATCTCTATcccatatttgattttttgttgaatGAGGTAAAAATCCCATTCCCTGATATTAGGAAATCGATTATACGGTGCCCCAGGTTGTTAGTTTGCAGCGTGGATGAACGACTGAGACCTGCATTGTTGTTCTTGAGGAATTTGGGGTTTGTGGGTTCGAATTCCATCAATTCCCAGACTGCATTGCTGATGGTTTCAAGTGTGGAAACTACCCTTTTGCCAAAGATTGAATATTTACAGAGTCTGGGCCTTACTTATGAGGAAGTAGGACATATGGCGATAAGGTCACCGGCTTTGTTGACATTTAGTATCAGGAACAATCTTATGCCAAAGGTGGAATATTTTTTAGGGGAGATGAATGGGGATATAGCTGAATTGAAGAGATTTCCACAATATTTTTCGTATAGTTTGGAGGAAAAAATTAAGCCAAGGCATAGGCTATTAGTCAAACAAAGGTTCTCACTTCCATTGGCGGAGATGTTGAAGGTTAGTGATGGTGAATTTAATGCTAGGTTAATTGAAATGCGACTACGTTCACTTGAGGGAAGGCAGTTGTTAGAAATTGCTTGTTCATACTTGCAATTGTATATTAAGCTGAGAATGGtgaaatttcattgttttggaGATTACATTTATGCATATacgtctttttattttaagttaactAAGCTTTATGTGTTTAACTTATATGGGAGACAGGATTG 1109 0.4121 MIIEISQLTIVSHSSPDPFPKPLQNPLFNLIRPFFTSFNGSLPSTPRFKFSRHAGTPPLSTSDSGLRFWEKIIYLQKLNVNPHKALRENPNFRSAPISSLKSVEDCLSSMGIERSAMGRILDMHPQLLTCDPHYDLYPIFDFLLNEVKIPFPDIRKSIIRCPRLLVCSVDERLRPALLFLRNLGFVGSNSINSQTALLMVSSVETTLLPKIEYLQSLGLTYEEVGHMAIRSPALLTFSIRNNLMPKVEYFLGEMNGDIAELKRFPQYFSYSLEEKIKPRHRLLVKQRFSLPLAEMLKVSDGEFNARLIEMRLRSLEGRQLLEIACSYLQLYIKLRMVKFHCFGDYIYAYTSFYFKLTKLYVFNLYGRQD 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00973 369 Pfam mTERF 66 303 IPR003690 GO:0003690|GO:0006355
Bva11g00973 369 PANTHER TRANSCRIPTION TERMINATION FACTOR MTEF1, CHLOROPLASTIC 54 317 - -
Bva11g00973 369 PANTHER CGI-12 PROTEIN-RELATED 54 317 IPR003690 GO:0003690|GO:0006355
Bva11g00973 369 Gene3D Transcription termination factor 3, mitochondrial 54 316 IPR038538 -
Bva11g00973 369 SMART mt_12 155 186 IPR003690 GO:0003690|GO:0006355
Bva11g00973 369 SMART mt_12 189 220 IPR003690 GO:0003690|GO:0006355
Bva11g00973 369 SMART mt_12 118 150 IPR003690 GO:0003690|GO:0006355
Bva11g00973 369 SMART mt_12 258 289 IPR003690 GO:0003690|GO:0006355
Bva11g00973 369 SMART mt_12 83 113 IPR003690 GO:0003690|GO:0006355
Bva11g00973 369 SMART mt_12 225 257 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00973 Bva-Chr11 11610427 11611536 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva11g00973 mTERF 1.4e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00973 K15032 - csin:114282080 403.675