Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00971 ATGGCCCTATCCCCTCCCCTCGTTCTTCCCCCTATAAATTCCCACCAATTCCTCCCATTTTTCTTCACTCATCTCCCTCACATTCCCTCTGACCATTCCTTGTTTGGCGCTTCAACATCAAAGAAAATGGCTCTCGTTGGGTTTCTCTTGGTGGGTCTTCTTTCAATGTTCTCCTCTGCTTATGGCTATGGTGGAGGATGGATCGATGCTCATGCTACCTTCTATGGAGGAAGTGATGCTTCTGGGACAATGGGTGGGGCTTGTGGATATGGGAACCTCTACAGTCAAGGGTATGGAACAAACACTGCAGCTCTCAGCACTGCTCTGTTCAACAATGGCTTAAGCTGTGGATCTTGCTATGAGATTAGGTGTGCGAATGACGGCAGATGGTGCCTGCCTGGCTCCATTGTGGTCACTGCCACCAATTTCTGCCCACCAAACAATGCCTTGCCCAACAATGCAGGTGGCTGGTGCAACCCTCCCCTCCAACATTTTGATCTCTCTCAGCCTGTTTTCCAGCGCATTGCTCAATATAAAGCTGGAATTGTTCCAGTTGCCTACAGAAGGGTGCCTTGCAGGAGAAGGGGAGGAATCAGGTTCACTATCAATGGCCATTCCTACTTCAACTTGGTTCTCATCACAAACGTTGGTGGTGCTGGTGACGTGCGCAGTGTGGCCATCAAAGGTTCAAGAACTGGTTGGATGCCAATGTCAAGAAACTGGGGCCAGAACTGGCAGAGCAATAACTACCTCAATGGCCAAAGCCTGTCCTTCAAGGTCACCACCAGTGATGGCCGTACGGTGGTGTCTTACAATGTTGCCCCTGCTGGCTGGTCCTTTGGCCAAACCTACACCGGCGGACAATTCCGTTG 872 0.5069 MALSPPLVLPPINSHQFLPFFFTHLPHIPSDHSLFGASTSKKMALVGFLLVGLLSMFSSAYGYGGGWIDAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCANDGRWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPLQHFDLSQPVFQRIAQYKAGIVPVAYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVRSVAIKGSRTGWMPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPAGWSFGQTYTGGQFR 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00971 290 PRINTS Expansin/Lol pI family signature 180 196 IPR007118 GO:0005576
Bva11g00971 290 PRINTS Expansin/Lol pI family signature 272 286 IPR007118 GO:0005576
Bva11g00971 290 PRINTS Expansin/Lol pI family signature 84 102 IPR007118 GO:0005576
Bva11g00971 290 PRINTS Expansin/Lol pI family signature 66 81 IPR007118 GO:0005576
Bva11g00971 290 PRINTS Expansin/Lol pI family signature 106 124 IPR007118 GO:0005576
Bva11g00971 290 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Bva11g00971 290 PRINTS Expansin signature 97 111 IPR002963 GO:0009664
Bva11g00971 290 PRINTS Expansin signature 124 135 IPR002963 GO:0009664
Bva11g00971 290 PRINTS Expansin signature 272 288 IPR002963 GO:0009664
Bva11g00971 290 PRINTS Expansin signature 172 185 IPR002963 GO:0009664
Bva11g00971 290 PRINTS Expansin signature 196 208 IPR002963 GO:0009664
Bva11g00971 290 PRINTS Expansin signature 208 229 IPR002963 GO:0009664
Bva11g00971 290 PRINTS Expansin signature 155 172 IPR002963 GO:0009664
Bva11g00971 290 PRINTS Expansin signature 136 146 IPR002963 GO:0009664
Bva11g00971 290 PRINTS Expansin signature 243 264 IPR002963 GO:0009664
Bva11g00971 290 PANTHER EXPANSIN-A10 49 290 - -
Bva11g00971 290 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 207 286 IPR007117 -
Bva11g00971 290 PANTHER EXPANSIN-A15 49 290 IPR002963 GO:0009664
Bva11g00971 290 SMART dpbb_1 102 187 IPR007112 -
Bva11g00971 290 Gene3D - 53 193 IPR036908 -
Bva11g00971 290 Gene3D - 197 289 IPR036749 -
Bva11g00971 290 Pfam Lytic transglycolase 102 187 IPR009009 -
Bva11g00971 290 Pfam Expansin C-terminal domain 198 275 IPR007117 -
Bva11g00971 290 SUPERFAMILY Barwin-like endoglucanases 66 215 IPR036908 -
Bva11g00971 290 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 85 197 IPR007112 -
Bva11g00971 290 SUPERFAMILY PHL pollen allergen 194 286 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00971 Bva-Chr11 11601324 11603190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00971 42 290 Expansin Gene Family AT2G03090 82.731 2.32e-156 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00971 - - gmx:100796316 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00971 11 11601324 11603190 Bva11g00971 11 11601324 11603190 ECH
Bva11g00971 11 11601324 11603190 Bva06g01209 06 9410780 9411787 ECH
Bva11g00971 11 11601324 11603190 Bva05g00492 05 2409645 2411261 ECH
Bva11g00971 11 11601324 11603190 Bva03g02129 03 18757072 18760547 ECH