Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00964 ATGGGAAGGTCACCTTGCTGTGAGAAAGTGGGGTTGAAAAAAGGACCGTGGACTCCAGAGGAAGACCAGAAGCTCATGGCTTTCATTGAAGAACATGGCCATGGAAGCTGGCGTGCATTGCCTGCAAAAGCTGGGCTTCAAAGATGTGGGAAGAGTTGCAGACTAAGGTGGACCAATTATCTTAGACCTGACATAAAAAGAGGCAAGTTTAGTTTGGAGGAAGAGCAGACCATCATTCGACTCCATGCTCTTCTTGGAAACAAATGGTCAACTATAGCAGCTCACTTACCCCAGAGAACTGACAATGAGATCAAGAACTGCTGGAACACCCACCTCAAGAAGAGACTAACCAAAATGGGCATTGACCCCATTACCCACAAGCCCAAAACTGATGCCGCCGGAACCGGCACCGGCACCGGCTCCGGCCACTCCAGGGATACCTCAAATCTGAGCCACATGGCCCAGTGGGAGAGTGCTCGGCTGGAAGCCGAAGCCAGATTAGTCCGAGAAACTAGGTTGGTGGTCCAGAACCAGCTCGGCTCCCCCTCCTCCAACTCCAAGCCAGCTCGGCTCATCCTCAACAAAATCTCACCTCAACCTTCTCTATCACCCCACCTAGATATCCTCAAAGCATCTCAACGATCATGGTGCAACACACAGTCAAACAAAGATCACACTAGAATGTATGACACGTACGCCATGATGCTCACCACCGATGACCTCGAGTCGCCGACCTCCACTTTGTGCTTCCCTGAAAGCATGCCACTTCCTATCTCAACCACCGCAGGGACACTCAACAACAACTTTCTTCCTTCCACAACCACCGCCCCGGCCGCCGTGGACATTAATGTTGCAAAAAGCTCAGCCTCTTACAAGGCTAATGGGAATGGTGCTAACTTGGGAAGCAGATGCCCTGCAGTCAAAAAACACACTGTTGCTGACATAGTGCAATGTGAATTGAAAGATGGATCGTATAGTTCGCATCATGTCATGTCAACGACTacaaaaaatatgaagttttTTTACTGCAGAAATTCTCGATCCGCCACCGGTGATAATGGGTCGTGGAAATATTTGCCTAAAGAAGCGGAACTTATTGAAAAAGGAGTGCATGATAGAGTGATGGACATGCAAGACGACAACATTATGGTGGCTGTGGAAGCATTCAGAGCAGCAGCAGGAGGAGGATATACCTCGAACGATGTCGTGGAAGCTTGTCTCAATGAAGATCTGCTTTGTGATCCCAATGAAGGTTTAGCGGCAGAAGAAGACAACCTGGAAATCATCAATGGGGATGGAAGTAACTCATGTGCCGTGAACTTTGAGGACAATAATAAGCATTATTGGAATAGCTTGCTGAATATGGTCAATGATTTGCCTTCTGGGTCGCCAGCGTTCTG 1400 0.4821 MGRSPCCEKVGLKKGPWTPEEDQKLMAFIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLEEEQTIIRLHALLGNKWSTIAAHLPQRTDNEIKNCWNTHLKKRLTKMGIDPITHKPKTDAAGTGTGTGSGHSRDTSNLSHMAQWESARLEAEARLVRETRLVVQNQLGSPSSNSKPARLILNKISPQPSLSPHLDILKASQRSWCNTQSNKDHTRMYDTYAMMLTTDDLESPTSTLCFPESMPLPISTTAGTLNNNFLPSTTTAPAAVDINVAKSSASYKANGNGANLGSRCPAVKKHTVADIVQCELKDGSYSSHHVMSTTTKNMKFFYCRNSRSATGDNGSWKYLPKEAELIEKGVHDRVMDMQDDNIMVAVEAFRAAAGGGYTSNDVVEACLNEDLLCDPNEGLAAEEDNLEIINGDGSNSCAVNFEDNNKHYWNSLLNMVNDLPSGSPAF 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00964 466 CDD SANT 69 112 IPR001005 -
Bva11g00964 466 SMART sant 66 114 IPR001005 -
Bva11g00964 466 SMART sant 13 63 IPR001005 -
Bva11g00964 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva11g00964 466 MobiDBLite consensus disorder prediction 132 148 - -
Bva11g00964 466 CDD SANT 16 61 IPR001005 -
Bva11g00964 466 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 374 459 - -
Bva11g00964 466 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 269 - -
Bva11g00964 466 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva11g00964 466 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 374 459 - -
Bva11g00964 466 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 269 - -
Bva11g00964 466 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva11g00964 466 Gene3D - 13 66 - -
Bva11g00964 466 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva11g00964 466 MobiDBLite consensus disorder prediction 122 148 - -
Bva11g00964 466 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva11g00964 466 Gene3D - 69 116 - -
Bva11g00964 466 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva11g00964 466 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00964 Bva-Chr11 11554408 11556949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00964 1 258 MYB Transcription Factor Family AT3G01140 60.078 1.02e-100 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva11g00964 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00964 K09422 - gmx:100799222 429.483
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00964 11 11554408 11556949 Bva11g00964 11 11554408 11556949 ECH