Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00957 ATGGATAGGTCAAGGTCACAATGCTTTGAGAAAGTGGGGTTGAAGAAAGGGCCATGGATTCCAGAGGAAGACCAGAAACTCATGGCTTTCATTGAAGAACATGACCATGGAACCTGGCATTCATTGCCTGGTAAAGCTGGGCTTCGAAGATGTGGGAAGAGTTTCAAACTGAGATGGATCAATTATCTTAGACCTGACATAAAAAGAGGCAAGTTCAGCTTGGAGGAAGAGCACACCATTGTTCGACTCCAAGCTTTTCTTGGAAACAAATGGTCAACTATAGCAGCCCACTTACCTCAGAGGACTGACTATGAGATCAAGAACTACTGGCACAACCACCTCAAGAAGAGACTAACCAAAGTAGGCATAGATCCCATCACCCACAGGCCCAAGACCAACGGCTTCGGCTACTCCAAGGATGTCTCCAATCTGAGCCACATGGCTCAGTGGGAGAGTGCTCGGCTGGAAGCCGAAGCCAGACTTGTCCAAGATTCTAGGTTGGAGAACCAGCTCAGCTCTAGCTTCTCCAAGCCAGCTCGGTTCATCCTCAACAAAATCTCACTTCCTCAACCTTCAGTTCCACCACCGTGCCTAGATGTTCTCACAGCATGGCAACGTTCATGGACTTCCAGTTCGCAATCAAATAAAGATCACACCACAGTGCATGACATGTACGCTACGATGCTCACCGCCGATGGCCTCGAGTCGCCGGCGTTCCCGGAAAGCATGCCACTTTCTATCTCAACCACCGTCGAGACACTCAACAATAACAAGGATGTCTCCAATCTGAGCCACATGGCTCAGTGGGAGAGTGCTCGGCTGGAAGCCGAAGCCAGACTCGTCCAAGATCCTAGGTTGGAGAACCAGCTCGACTCCAGCTTTCCTCAACCTTCAGTTCCACCACCGTGCCCAGATGTTCTCACAGCATGGCAACGTTCATGGACGTCCAGTTCGCAATCAAATAAAGATCACACCACAGTGCATGACATGTACGGCATGATGCTCACCGCCGATGGCCTCGAGTCGCCAGCGTTCCCGGAAAGCATGCCACTTCCTATCTCAACCACCGTTGAGACACTCAACAATAACTTTCTTCCCTCCACAACCACTGCCTCATGCGAGGGTAATGGCAATTGTGTTAATTTGATAGAAACCAGTGGCGATAATGAGTCATGGAAATATTTGCCCAAAGAAGTGTATGATGGAGCGTTGGACTTGCAAGATGATAACATCATGGTGGCTGTGGAAGCATTCATGAGAGCATCAGCAGGATATAAATGTCATTTGTA 1289 0.4911 MDRSRSQCFEKVGLKKGPWIPEEDQKLMAFIEEHDHGTWHSLPGKAGLRRCGKSFKLRWINYLRPDIKRGKFSLEEEHTIVRLQAFLGNKWSTIAAHLPQRTDYEIKNYWHNHLKKRLTKVGIDPITHRPKTNGFGYSKDVSNLSHMAQWESARLEAEARLVQDSRLENQLSSSFSKPARFILNKISLPQPSVPPPCLDVLTAWQRSWTSSSQSNKDHTTVHDMYATMLTADGLESPAFPESMPLSISTTVETLNNNKDVSNLSHMAQWESARLEAEARLVQDPRLENQLDSSFPQPSVPPPCPDVLTAWQRSWTSSSQSNKDHTTVHDMYGMMLTADGLESPAFPESMPLPISTTVETLNNNFLPSTTTASCEGNGNCVNLIETSGDNESWKYLPKEVYDGALDLQDDNIMVAVEAFMRASAGYKCHL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00957 429 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Bva11g00957 429 Pfam Myb-like DNA-binding domain 69 114 IPR001005 -
Bva11g00957 429 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Bva11g00957 429 SMART sant 15 65 IPR001005 -
Bva11g00957 429 SMART sant 68 116 IPR001005 -
Bva11g00957 429 Gene3D - 15 68 - -
Bva11g00957 429 Gene3D - 71 133 - -
Bva11g00957 429 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 257 422 - -
Bva11g00957 429 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Bva11g00957 429 CDD SANT 71 114 IPR001005 -
Bva11g00957 429 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Bva11g00957 429 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 63 IPR017930 -
Bva11g00957 429 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 64 118 IPR017930 -
Bva11g00957 429 CDD SANT 18 63 IPR001005 -
Bva11g00957 429 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 257 422 - -
Bva11g00957 429 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 5 248 - -
Bva11g00957 429 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 5 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00957 Bva-Chr11 11528095 11529659 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00957 4 167 MYB Transcription Factor Family AT5G15310 69.048 8.39e-82 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva11g00957 Myb_DNA-binding 6.3e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00957 K09422 - gmx:100799222 328.946