Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00954 ATGAGCTCCGAAGACATAGGCGGCCATTCCTCCGGAAATTCCGGCTGCTCTGCAGCGGCGGAGAAGGACAAGGGTAAGGAGAAGGCTAGAGTGAGTCGTACTTCCTTGATACTGTGGCATGCCCACCAGAACGATGCTGCGTCGGTTCGCAAGCTTCTGGAGGAGGATCGGACACTGGTGAACGCAACTGATTACGATAATCGCACCCCACTTCACGTGGCTTCACTCCATGGCTGGGTCGAGGTTGCCAAGTGTTTGATTGAATTTGGTGCTGACGTCAACGCGCAGGATCGTTGGAAGAACACtCCTCTGGCTGATGCAGAAGGAGCTAAAAAGACTGCCATGATCGAGCTTTTGAAATCATATGGAGGTTTGTCTTATGGCCAAAATGGAAGCCATTTTGATCCAAAGTCTGTCCCACCCCCGTTGCCTAACAAGTGTGATTGGGAAATCGAGCCATCTGAGTTGGACTTCTCAAATTCAACTCGTATTGGAAagGGATCTTTTGGTGAGATTTTAAAAGCCCATTGGCGTGGAACACCTGTTGCTGTGAAGCGCATTCTACCATCCCTTTCAGATGATAGATTGGTGATTCAGGACTTCAGGCATGAGGTAAATCTTCTAGTGAAGCTTCGACACCCAAATATAGTCCAGTTTCTTGGAGCTGCTACCGAGAGGAGGCCCCTTATGCTAATCACTGAGTATCTAAGGGGGGGTGATCTTCATCTGTATCTCAAGGAAAAAGGTGCACTTAGTCCTTCGACTGCTATCAACTTTGCCTTGGATATTGCCAGAGGGATGGCCTATCTTCACAATGAACCAAATGTTATAATTCATCGAGACTTGAAGCCAAGGAATGTTCTTTTAGTTAACTCTAATGCTGACCATTTAAAAGTTGGAGATTTTGGACTGAGTAAGCTTATCAAGGTTCAGAGTTCTCATGATGTTTACAAGATGACTGGTGAAACTGGAAGCTACCGCTATATGGCTCCTGAAGTTTTCAAACACCGGAGATATGATAAGAAGGTTGATGTGTTCTCCTTTGCAATGATTCTCTACGAGATGCTTGAAGGGGAACCACCTTTTGCAAATTGTGAACCTTATGATGCAGCCAAATATGTGGCAGAAGGACGCAGGCCTACTTTTCGAGCAAAGGGATTTACTCCCGAACTGCGAGAGTTAACGGAGCAGTGTTGGTCGGCTGATATGAACCAAAGACCATCCTTCATAGATATCCTCAAACGGCTTGAAAAGATTAAGGGCATTTTACCTACTGATCATCACTGGCACTTGTTCTCCTCATA 1304 0.4601 MSSEDIGGHSSGNSGCSAAAEKDKGKEKARVSRTSLILWHAHQNDAASVRKLLEEDRTLVNATDYDNRTPLHVASLHGWVEVAKCLIEFGADVNAQDRWKNTPLADAEGAKKTAMIELLKSYGGLSYGQNGSHFDPKSVPPPLPNKCDWEIEPSELDFSNSTRIGKGSFGEILKAHWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNIVQFLGAATERRPLMLITEYLRGGDLHLYLKEKGALSPSTAINFALDIARGMAYLHNEPNVIIHRDLKPRNVLLVNSNADHLKVGDFGLSKLIKVQSSHDVYKMTGETGSYRYMAPEVFKHRRYDKKVDVFSFAMILYEMLEGEPPFANCEPYDAAKYVAEGRRPTFRAKGFTPELRELTEQCWSADMNQRPSFIDILKRLEKIKGILPTDHHWHLFSS 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00954 434 ProSiteProfiles Ankyrin repeat region circular profile. 66 98 - -
Bva11g00954 434 Pfam Ankyrin repeats (3 copies) 33 97 IPR002110 GO:0005515
Bva11g00954 434 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 19 426 - -
Bva11g00954 434 Gene3D Transferase(Phosphotransferase) domain 1 238 427 - -
Bva11g00954 434 MobiDBLite consensus disorder prediction 1 27 - -
Bva11g00954 434 ProSiteProfiles Ankyrin repeat profile. 66 98 IPR002110 GO:0005515
Bva11g00954 434 MobiDBLite consensus disorder prediction 1 17 - -
Bva11g00954 434 Gene3D - 9 135 IPR036770 -
Bva11g00954 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Bva11g00954 434 Pfam Protein tyrosine and serine/threonine kinase 161 416 IPR001245 GO:0004672|GO:0006468
Bva11g00954 434 PRINTS Tyrosine kinase catalytic domain signature 233 246 IPR001245 GO:0004672|GO:0006468
Bva11g00954 434 PRINTS Tyrosine kinase catalytic domain signature 387 409 IPR001245 GO:0004672|GO:0006468
Bva11g00954 434 PRINTS Tyrosine kinase catalytic domain signature 271 289 IPR001245 GO:0004672|GO:0006468
Bva11g00954 434 PIRSF ILK 2 434 - -
Bva11g00954 434 ProSiteProfiles Protein kinase domain profile. 158 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00954 434 SMART serkin_6 158 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00954 434 Gene3D Phosphorylase Kinase; domain 1 142 237 - -
Bva11g00954 434 ProSitePatterns Protein kinases ATP-binding region signature. 164 185 IPR017441 GO:0005524
Bva11g00954 434 CDD STKc_MAP3K-like 164 416 - -
Bva11g00954 434 SUPERFAMILY Ankyrin repeat 37 124 IPR036770 -
Bva11g00954 434 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 19 426 - -
Bva11g00954 434 SMART ANK_2a 66 95 IPR002110 GO:0005515
Bva11g00954 434 SUPERFAMILY Protein kinase-like (PK-like) 147 429 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00954 Bva-Chr11 11509248 11514495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00954 7 434 MAP Kinase Kinase Kinase AT1G14000 84.112 0.0 738
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Bva11g00954 PK_Tyr_Ser-Thr 5.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00954 - - rcu:8281850 770.77