Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00951 ATggccaaaagaagaagagaaagagaagctgAAGAAGAGAACAATAATGAGAGTGATGAAAACATTGACTTAGAGAAGCTAAAACAAGAAGCAGCAGCAGTTACAGCTGCTCTAGTTGGAGCCCGGAGAGCTCGAAAACGGTTCATTGGCGTGCGCCAAAGGCCTTCAGGAAGATGGGTTGCTGAGATCAAAGACACCATACACAAGATAAGACTATGGTTAGGCACTTATGACACTGCAGAAGAGGCTGCAAGAGCTTATGATGAAGCAGCTTGTCTGCTTCGTGGATCCAATACTCGCACAAATTTCTGGCCTTCCCCTAATTCTCACTCTAACCCAGCTCTTCCCTCAAAGATTGctaatcttcttcttcttaggCTCAAAGCTAGAACCAATGCCTATGCTTCTGCAGTTACTCCTCCTTTTCCTGCTAGCCCATTTGAGCAGAAAGCACAACTAGACTTGCCCCAGTTCGGAAATTCTCTGGGTGTACCAGAAACTGGGATTGTTGCAGAAAGTTATGGACTTTCCAGTTATACAGATGATTTTCTGCAAATTCCAGAAACTGGGGTTACTGTTACAGAAGGTTATGATGATGCTAGTTATAGTTCTGGCGCTATAACTAGCTGTGACATTAGTTATGGAAGTGCTGAAGTAAATTTTAACCAAGGGGATTATGCagagaaatttgatttgaggTATGATGGTGCTGGTAGTGTTGATGATGGTAACAATGGGATTATGAATGAAAAAGGAGCATTCGGAGACTGTGAAATGGGGTTTTTTGACTTCCAGTTTGTAGACACTGGGGGATCGATTTGTTATTCTTCTCCATTTGAGGTGGCAGAGGAGATGGTGGGGCCGATAGAGGAAGAGAGTTATGGGGATGAGCCACCATTTCTGAGAGAAActatgaagatgatgaaataTGAACGCAAAGTCTCAGCTTGTCTTTACACCTTCAATGGAGTGTCCGAGTGTTTGAGATTGAAACGAAGATCAGAGAGTGCAAATGGGTATGGattattttg 1031 0.3986 MAKRRREREAEEENNNESDENIDLEKLKQEAAAVTAALVGARRARKRFIGVRQRPSGRWVAEIKDTIHKIRLWLGTYDTAEEAARAYDEAACLLRGSNTRTNFWPSPNSHSNPALPSKIANLLLLRLKARTNAYASAVTPPFPASPFEQKAQLDLPQFGNSLGVPETGIVAESYGLSSYTDDFLQIPETGVTVTEGYDDASYSSGAITSCDISYGSAEVNFNQGDYAEKFDLRYDGAGSVDDGNNGIMNEKGAFGDCEMGFFDFQFVDTGGSICYSSPFEVAEEMVGPIEEESYGDEPPFLRETMKMMKYERKVSACLYTFNGVSECLRLKRRSESANGYGLF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00951 343 CDD AP2 46 103 IPR001471 GO:0003700|GO:0006355
Bva11g00951 343 Pfam AP2 domain 47 96 IPR001471 GO:0003700|GO:0006355
Bva11g00951 343 SUPERFAMILY DNA-binding domain 47 105 IPR016177 GO:0003677
Bva11g00951 343 Gene3D AP2/ERF domain 46 104 IPR036955 GO:0003700|GO:0006355
Bva11g00951 343 PRINTS Ethylene responsive element binding protein signature 70 86 IPR001471 GO:0003700|GO:0006355
Bva11g00951 343 PRINTS Ethylene responsive element binding protein signature 48 59 IPR001471 GO:0003700|GO:0006355
Bva11g00951 343 Coils Coil 1 44 - -
Bva11g00951 343 ProSiteProfiles AP2/ERF domain profile. 47 104 IPR001471 GO:0003700|GO:0006355
Bva11g00951 343 MobiDBLite consensus disorder prediction 1 23 - -
Bva11g00951 343 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 4 340 - -
Bva11g00951 343 PANTHER AP2/ERF DOMAIN TRANSCRIPTION FACTOR 4 340 - -
Bva11g00951 343 SMART rav1_2 47 110 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00951 Bva-Chr11 11497767 11498798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00951 45 123 AP2-EREBP Transcription Factor Family AT5G19790 70.886 3.32e-31 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva11g00951 AP2 1.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00951 K09286 - jre:109003219 276.174