Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00945 ATGGGTGGAAGGGGAGAGCAACCACCACCGTCGAGGGCGGCGGGGCAACCGCTGCCACGACCCACTATCTCTCTCCCTTCACGCACTTCAATGGAGAGTCTTTTTAATGGTGGGCTCCCTGCTGGCGGCGGCTTTGGATTTAGCCCTGGTCCCATGACTTTAGTCTCAAGCTTCTTCTCCGACAACGATGACTACAAGTCCTTTTCTCAGCTCCTTGCTGGTGCTATGCCATCTCCGGTGGCCAATTCCGTTGAAGGTGGTAGCTTTAAGCAGAATAGACCCTCAGGTTTGGCTATTGTGCACTCGCCGATGTTCACAGTTCCACCTGGGTTGAGCCCTCCTGGGTTCCTCGATTCGCCTGGGCTTTTCTCACCTACTCAGGCACCCTTTGGAATGACACACCAGCAGGCCCTGGTACAGGTCACAGCTCAGGCTGTGCAGGCGCAATCTAATGTACATATGCAAGCTGAACGTCCATCTTCAGTATCAGCAGCACCTGCTACCTCGCTGTTGCAGGTTCCTTCATCTACTTCCCATACTAGTTCTGCACAGCAGCTTATGCCACTCTCAATGCCAGAATCTGGGGCAGCACTTAAAGAATCCCATGATTATTCTCACTCTGATGAACAAAAACTGCACTCCTCTTCACTGAATGTCGATAAGCCTGCTGAAGATGGCTACAATTGGCGCAAGTATGGGCAGAAACAGGTTAAAGGCAGTGAATTTCCTCGGAGTTATTACAAGTGCACACATCCAAACTGTCCTGTCAAGAAAAAGGTTGAACGCTCGCTTGATGGCCATGTGACTGCAATTATTTACAAAGGCCAGCATAATCATCAACCTCCTCAGTCCAAGAAGCGCGCAAAAGATGCTGCAGCgtcaaatgaaaattcaagCTTGCAAGGTAATCTTGATGCAACTTATCAAGTGCTGAGTGGAAGTTTGAAAGATGGGATAACTTTCCACTCAATGGCTACAATGGAACTGGAATCTAGTCAGGCAACAGCTGAAAATCTATCAGGAAGTGACATCGAGGAGGTTGGCGATCAAGAAACTGAAGTGGAGGAGAAAAATGATGAGCCTGACCCCAAAAGAAGAAATACTGAAGTCACTGTCCCTGAGACAGCTTCATCGCATAGTGCCGTTACAGAGTCTAAAATCATTGTGCAGACAACAAGTGAAGTTGATCTCTTAGACGATGGCTATAGGTGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTACTATAAATGCACAACCCCAGGTTGCAATGTCAGGAAGCATGTTGAGAGGGCATCAACAGACCCTAAAGCTGTCATAACAACTTATGAAGGAAAACATAATCACAACGTGCCAGCCGCGAAAACTAATAGCCACACTCTTGCCAACAATACCGCATCACAGATTAAACCACACAATGCTGTAACTCAGAATCACGGTTCTAGCACCAGAGATCTTGGGAGCAATGATCATCAGCCCGTGGCACGTCTAAGGCTAAAGGAAGAGCAGATAACTTA 1535 0.4762 MGGRGEQPPPSRAAGQPLPRPTISLPSRTSMESLFNGGLPAGGGFGFSPGPMTLVSSFFSDNDDYKSFSQLLAGAMPSPVANSVEGGSFKQNRPSGLAIVHSPMFTVPPGLSPPGFLDSPGLFSPTQAPFGMTHQQALVQVTAQAVQAQSNVHMQAERPSSVSAAPATSLLQVPSSTSHTSSAQQLMPLSMPESGAALKESHDYSHSDEQKLHSSSLNVDKPAEDGYNWRKYGQKQVKGSEFPRSYYKCTHPNCPVKKKVERSLDGHVTAIIYKGQHNHQPPQSKKRAKDAAASNENSSLQGNLDATYQVLSGSLKDGITFHSMATMELESSQATAENLSGSDIEEVGDQETEVEEKNDEPDPKRRNTEVTVPETASSHSAVTESKIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCNVRKHVERASTDPKAVITTYEGKHNHNVPAAKTNSHTLANNTASQIKPHNAVTQNHGSSTRDLGSNDHQPVARLRLKEEQIT 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00945 511 MobiDBLite consensus disorder prediction 474 495 - -
Bva11g00945 511 Pfam WRKY DNA -binding domain 399 455 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva11g00945 511 Pfam WRKY DNA -binding domain 224 280 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva11g00945 511 ProSiteProfiles WRKY domain profile. 224 282 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva11g00945 511 MobiDBLite consensus disorder prediction 273 300 - -
Bva11g00945 511 SUPERFAMILY WRKY DNA-binding domain 390 458 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva11g00945 511 MobiDBLite consensus disorder prediction 199 215 - -
Bva11g00945 511 SMART WRKY_cls 398 457 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva11g00945 511 SMART WRKY_cls 223 281 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva11g00945 511 MobiDBLite consensus disorder prediction 1 31 - -
Bva11g00945 511 MobiDBLite consensus disorder prediction 474 511 - -
Bva11g00945 511 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 15 510 - -
Bva11g00945 511 MobiDBLite consensus disorder prediction 331 383 - -
Bva11g00945 511 MobiDBLite consensus disorder prediction 194 226 - -
Bva11g00945 511 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 15 510 IPR044810 GO:0003700
Bva11g00945 511 ProSiteProfiles WRKY domain profile. 393 458 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva11g00945 511 SUPERFAMILY WRKY DNA-binding domain 222 282 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva11g00945 511 Gene3D WRKY domain 382 459 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva11g00945 511 Gene3D WRKY domain 209 283 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00945 Bva-Chr11 11469311 11472507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00945 1 511 WRKY Transcription Factor Family AT2G03340 54.693 5.28e-174 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva11g00945 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00945 - - jre:109002894 640.958