Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00908 ATGGAAAGCCACACTAGCAGTATCAGCAGCAATAACAGTAACGACGACAGCATCTCCTGCACCAACACCCACATCCAGTGGAGAGCTGAGGAAGCCATTGGTGGAAACGCAGAAGCTCTTCAAACTCTAAGAGAACTTATCATATTCCCACTTCACTATTCTCGCCAAGCTCAGAAGCTCGGTCTCAAAGTAGAGCTGATTCCTTTTTGTCTTTGCTGGCCTCGAGGGTTGCTGCTATATGGTCCACCAGGCACGGGAAAGACAAGTTTGGTGCGGGCAGTTGTTCAAGAATGTGGGGCACATTTGAAACTTATCAGTCCACATTCTGTTCATAGAGCCCATGCTGGTGAAAGTGAGAGAATTCTACGCGAGGCTTTTGCAGAGGCATCATCACATGCAGCTTTGGGCAAGccatctattatttttatagatgaAATAGATGCACTCTGTCCTCGACGTGATTCCAAAAAGGAGCAAGATGTCCGAGTTGCATCGCAGCTCTTCACACTGATGGACTCAAACAAACCATCCTCTTCTACGCCAGGAGTTGTTGTGGTTGCATCAACTAACAGAGTGGATGCTATTGACCCTGCACTAAGAAGGTCTGGACGTTTTGATGCTGAAATTGAAGTTACTGTCCCAACTGAAGAGGAGCGCTTCCAAATTCTTAAGCTGTATACAAAGAAGATTCCCTTGGATCCCAGCGTTGACTTAAAAGTCATTGCTGCATCTTGCAATGGATATGTTGGTGCTGATTTGGAGGCCTTGTGCCGTGAGGCCACCATGCTTGCAGTTAAAAGATCCTCCTATACAAATCAAGGTGTGAGCATTTTCAATTTAACAATGGAAGATTGGAAGAATGCAAGATCTGTTGTTGGTCCAAGCATTACAAGAAGTGTTACTGTTGAAATTCCTAAAGTGACTTGGGAAGATATTGGGGGactaaaagaattaaagAAAAAGCTCCAGCAAGCTGTTGAATGGCCTGTCAAGCATTCTGCTGCATTTTCAAGACTGGGAATATCTCCTGTGCGTGGAATTCTCTTGCATGGGCCTCCAGGATGTTCCAAAACAACCCTTGCCAAAGCTgctgcacatgctgcccaagcttctttcttttctttgagTGGTGCAGAATTGTATTCAATGTATGTCGGTGAGGGAGAAGCTTTACTTCGTAACACATTTCAGAGAGCACGCCTTGCAGCACCCAGCATAATATTCTTTGATGAGGCTGATGTCGTAGCTGCCAAACGGGGTGGTGATAGTTTAGGCAATACCACTACAGTAGGAGAGAGGCTTCTATCCACACTTCTTACCGAGATGGATGGCCTAGAAGAAGCTAAAGGAATTCTTGTTTTAGCAGCTACAAATCGTCCGTATGCAATTGATGCTGCACTTATGCGTCCTGGACGTTTTGATCTGGTGCTGTATGTGCCGCCGCCTGATTTGGAAGCTCGATATGAGATACTTTGCGTACATAACCGTAACATGAAAGTAGGGAGTGATGTCAACCTAAGAAGAATAGCAGAAGATACTGAGCTTTTCACAGGTGCTGAACTGGAGGGCTTATGCAAGGAAGCTGGTATTGTGGCTCTGAGGGAAGACATATCTGCTGCTGTTGTGTGTGATCACCATTTCCGGATAGCCAAGAATTCTCTAAATCCTGCATTAACCAAAGCAGAAATCCATCGGTACTCGTCTTTTATGAAGACATCCTCCTCTGTGTCTTGTGGGCATTCTGAATCGAGTTCCGAAGAGGATATGAAGAAAAGGAGTAGGTTGCTTCCTCTGTCTTTGgttagagttggtattttcaGTTTTGTGTTGCTTGCAGCTGCTAAATACTTTATTATGCATGGACAAGAAACTGAACGTGAACTAGCCATGACTTG 1895 0.4311 MESHTSSISSNNSNDDSISCTNTHIQWRAEEAIGGNAEALQTLRELIIFPLHYSRQAQKLGLKVELIPFCLCWPRGLLLYGPPGTGKTSLVRAVVQECGAHLKLISPHSVHRAHAGESERILREAFAEASSHAALGKPSIIFIDEIDALCPRRDSKKEQDVRVASQLFTLMDSNKPSSSTPGVVVVASTNRVDAIDPALRRSGRFDAEIEVTVPTEEERFQILKLYTKKIPLDPSVDLKVIAASCNGYVGADLEALCREATMLAVKRSSYTNQGVSIFNLTMEDWKNARSVVGPSITRSVTVEIPKVTWEDIGGLKELKKKLQQAVEWPVKHSAAFSRLGISPVRGILLHGPPGCSKTTLAKAAAHAAQASFFSLSGAELYSMYVGEGEALLRNTFQRARLAAPSIIFFDEADVVAAKRGGDSLGNTTTVGERLLSTLLTEMDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARYEILCVHNRNMKVGSDVNLRRIAEDTELFTGAELEGLCKEAGIVALREDISAAVVCDHHFRIAKNSLNPALTKAEIHRYSSFMKTSSSVSCGHSESSSEEDMKKRSRLLPLSLVRVGIFSFVLLAAAKYFIMHGQETERELAMT 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00908 631 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 37 553 - -
Bva11g00908 631 Pfam ATPase family associated with various cellular activities (AAA) 347 480 IPR003959 GO:0005524|GO:0016887
Bva11g00908 631 Pfam ATPase family associated with various cellular activities (AAA) 77 211 IPR003959 GO:0005524|GO:0016887
Bva11g00908 631 Gene3D - 215 297 - -
Bva11g00908 631 Gene3D - 298 481 IPR027417 -
Bva11g00908 631 SMART AAA_5 343 483 IPR003593 -
Bva11g00908 631 SMART AAA_5 73 215 IPR003593 -
Bva11g00908 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 297 IPR027417 -
Bva11g00908 631 Pfam AAA+ lid domain 503 548 IPR041569 -
Bva11g00908 631 Pfam AAA+ lid domain 235 269 IPR041569 -
Bva11g00908 631 CDD AAA 74 211 - -
Bva11g00908 631 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 305 566 IPR027417 -
Bva11g00908 631 PANTHER AAA-FAMILY ATPASE 37 553 - -
Bva11g00908 631 ProSitePatterns AAA-protein family signature. 451 469 IPR003960 GO:0005524|GO:0016887
Bva11g00908 631 Gene3D - 20 214 IPR027417 -
Bva11g00908 631 CDD AAA 313 481 - -
Bva11g00908 631 Gene3D - 482 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00908 Bva-Chr11 11284516 11289692 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00908 273 606 Calmodulin-binding Proteins AT3G56690 42.433 1.13e-81 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00908 - - gmx:100814288 950.658