Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00904 ATGGATCAGAGCTCGTACCGAACCCGAAAATCCCGAGCAAAATCCGAGCTATACTCCACCGTTGTGGTGCACGACGACGAAGAAGAGGATGTCTATGATAAGAGACGGAAGTCCAGAAGCACGGAGCCCGAAGAAGATTTGTATGCAACAATGGTGTACAAAGACAATGGGAATGAAGAAGACGAAGATGATGACTCTTCTCTCCCTCCTCTCCTTAAGCGAGAGCGACTGCCCAAAGACTTTGGTGGGGGAGCCTCAATGGACTACGATGACGATTTGCAGGAAGACGCCGGCGATTTTGGCACAATGATTGTGAAGACCCGGCAACGAAATCGGTCATCATCTTTTTCACCGTCCATGGGTTCGACCTGGAAGGCTCGAAGCTCTCCTTATATGCAGGCGAGTCCCAGGAAGAAAGTTGCCAGTGAggttgatgaagaagaagatgatgatggtgaCGATGGATTCTCAACCTTTGTTGTGCGGTCTACGACCACGTCCAGTGAGAGAGAGTCGGTGAGTGGAACCATGGTGCGGAGGACGAGTGGTGGTTCTGGTGGCACAATTGGTACTGGGTCGACAATGGAAAGAGCGGTGGCGAGTATGCAGGCTGTTGGGGAGCGGGGATTGGGGAAACAAAGGAAGGGAAGTGGGTCCTCGCAGAATGAGGTGAGTAGGCAATCGATAGCGGCTAAGATGTCGTCGAGTTCGATCCCAGAAAGTGTTACCAGAGAGGATCCAACAACCAAATACGAATTGCTCAATGAACTTGGGAAGGGATCGTACGGATCTGTTTACAAAGCTAGGGATTTAAGAACTTCGGAAATGGTGGCTATCAAAGTCATATCACTAACAGAAGGAGAGGAGGGGTATGAGGAAATCCGTGGTGAAATTGAGATGTTGCAGCAATGTAATCATCCAAATGTAGTTCGTTATCTCGGAAGTTATCAAGGAGAAGAGTATCTTTGGATAGTTATGGAGTACTGTGGTGGTGGTAGTGTTGCTGACTTGATGAATGTGACCGAGGAGCCATTGGATGAGGGTCAAATAGCGTATATTTGTAGAGAAGCTTTGAAGGGCCTTGAATATTTGCACTCAATCTTCAAGGTCCATAGAGACATTAAAGGCGGGAATATATTATTAACCGAGCAAGGAGATGTCAAGCTAGGGGATTTTGGTGTTGCTGCGCAGCTGACCAGGACCATGTCTAAACGCAATACGTTCATTGGAACCCCTCACTGGATGGCTCCAGAAGTAATTCAGGAAAGCCGCTATGATGGGAAGGTAGATGTGTGGGCTCTTGGTGTGTCTGCAATTGAAATGGCAGAGGGCCTTCCACCAAGATCAGCAGTGCATCCAATGAGGgTGTTATTCATGATTTCCATTGAACCAGCACCAATGCTTGaggataaagaaaaatggtctctgtattttcatgattttgttGCCAAGTGCCTTACCAAAGAACCTCGTCTACGCCCAACTGCATGTGAGATGCTAAAGCATAAATTCCTTGACAAATGGAAAACTGGAGCTGCTGTGATTatgccaaaaattgaaaaggcaAGGCGAATCAGGGCTGAGGCTTTGCAAGTGCAAACTCTTGCTCCAGCTGCATTAGAAGATCAGCCAATGGTAGCTGAAAAGCTGAATGATGAATATGGGGATACTGTTCCATCACGACCTCATAATATTGGAATTTTGGGGGCAGATGATATCTCTTCAGATAGCACTCTGAGGAAGCTACATAAATTGGAAAATGTGGAAACAAGTGAAGGTAACTTTGGCACTGTGGTAATCCATGGAGATGAGGTAGACACAACGGTTGGGTTGCAGGGTTTAGATTCTGCAGATTCCTCATCTACTTCCTTCATTTCTAGCACAGGGGGCAAATTAGCTGACCCTGGGGTTGGGAGTCTAAATTATGCAGCAGCAAACAGAGGATCTAGTCCTATTCCTTCCGTACAGACATCTTCACCTCCCATTAACAACGTAACAGAGCAGaatctcaaaataaaaggTGCTTTTCGAGCACAAGATGGAATCGGCACATTGAAGAATGAAACCATCAACGGCAAAGCATTTGCTTTGCAAGATAAGCTTTGGTCCATTTATGCTGCTGGTAATACAGTACCCATTCCATTCTTAAGGGCGACGGATGTATCACCTATTGCTCTTCTGTCAGATAATGTGCTTGGGGGCATGCAACAGCATATCAATGGAGCTGCAACTGTTGAAGCATTGCAAGAGCTTTTTAGTGGGGATGGACAGTCCAAAAAGGGTCGGAGAGGACAAATAGAGCAGATGCCACTGCCTCCAAGCATTTATCAAAGACTGACATCAAGCTCCACACTATTGAATTTGGCACAAGCTTTAGCTTACCACAAGAcgTGTTATGAAGATATGCCACTCCAGGAGAGGCAAGCAGCCGAAGCACAGCAGACCATTCAAAATCTTACTGACACACTTCGTACCATTCTTCGTTTGTA 2489 0.4472 MDQSSYRTRKSRAKSELYSTVVVHDDEEEDVYDKRRKSRSTEPEEDLYATMVYKDNGNEEDEDDDSSLPPLLKRERLPKDFGGGASMDYDDDLQEDAGDFGTMIVKTRQRNRSSSFSPSMGSTWKARSSPYMQASPRKKVASEVDEEEDDDGDDGFSTFVVRSTTTSSERESVSGTMVRRTSGGSGGTIGTGSTMERAVASMQAVGERGLGKQRKGSGSSQNEVSRQSIAAKMSSSSIPESVTREDPTTKYELLNELGKGSYGSVYKARDLRTSEMVAIKVISLTEGEEGYEEIRGEIEMLQQCNHPNVVRYLGSYQGEEYLWIVMEYCGGGSVADLMNVTEEPLDEGQIAYICREALKGLEYLHSIFKVHRDIKGGNILLTEQGDVKLGDFGVAAQLTRTMSKRNTFIGTPHWMAPEVIQESRYDGKVDVWALGVSAIEMAEGLPPRSAVHPMRVLFMISIEPAPMLEDKEKWSLYFHDFVAKCLTKEPRLRPTACEMLKHKFLDKWKTGAAVIMPKIEKARRIRAEALQVQTLAPAALEDQPMVAEKLNDEYGDTVPSRPHNIGILGADDISSDSTLRKLHKLENVETSEGNFGTVVIHGDEVDTTVGLQGLDSADSSSTSFISSTGGKLADPGVGSLNYAAANRGSSPIPSVQTSSPPINNVTEQNLKIKGAFRAQDGIGTLKNETINGKAFALQDKLWSIYAAGNTVPIPFLRATDVSPIALLSDNVLGGMQQHINGAATVEALQELFSGDGQSKKGRRGQIEMPLPPSIYQRLTSSSTLLNLAQALAYHKTCYEDMPLQERQAAEAQQTIQNLTDTLRTILRL 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00904 828 SMART serkin_6 251 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00904 828 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 193 818 - -
Bva11g00904 828 Gene3D Transferase(Phosphotransferase) domain 1 247 537 - -
Bva11g00904 828 MobiDBLite consensus disorder prediction 207 247 - -
Bva11g00904 828 MobiDBLite consensus disorder prediction 106 130 - -
Bva11g00904 828 SUPERFAMILY Protein kinase-like (PK-like) 233 525 IPR011009 -
Bva11g00904 828 MobiDBLite consensus disorder prediction 214 244 - -
Bva11g00904 828 MobiDBLite consensus disorder prediction 158 192 - -
Bva11g00904 828 PANTHER SERINE/THREONINE-PROTEIN KINASE TAO 193 818 - -
Bva11g00904 828 Coils Coil 801 828 - -
Bva11g00904 828 MobiDBLite consensus disorder prediction 106 192 - -
Bva11g00904 828 MobiDBLite consensus disorder prediction 25 44 - -
Bva11g00904 828 CDD STKc_MAP4K3_like 250 504 - -
Bva11g00904 828 ProSitePatterns Protein kinases ATP-binding region signature. 257 280 IPR017441 GO:0005524
Bva11g00904 828 ProSiteProfiles Protein kinase domain profile. 251 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00904 828 MobiDBLite consensus disorder prediction 25 94 - -
Bva11g00904 828 Pfam Protein kinase domain 251 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00904 828 MobiDBLite consensus disorder prediction 67 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00904 Bva-Chr11 11267183 11276142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00904 1 828 MAP Kinase Kinase Kinase Kinase AT1G69220 59.535 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Pl Bva11g00904 Pkinase 8.5e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00904 - - gmx:100804995 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00904 11 11267183 11276142 Bva11g00904 11 11267183 11276142 ECH