Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bva11g00903 | ATGGCTCTATCTGGAGGTCACAAAAATAGAGGGGAGTTGAGGGTTCATGAGAGTTTGGATGAGCTAAAGACTGATTTGGCAGACTATATCGCTGAAATATCAGAAGCCTCTGTGAAGGAGCGGGGAGTCTTTGCCATTGCTTTATCTGGTGGTTCTCTCATTGGATTAATGGGAAAACTCTGTGAAGCTCCTTACAACAAGACAGTAGACTGGTCCAAATGGTATATCTTCTGGGCCGACGAACGTGTTGTGGCAAAAAACCATGCTGACAGCAACTATAAGCTCGCAAAAGATGGACTTTTGTCCAAGGTGCCTGTTATTCCCAGTCATGTGCATTCTATAAATGATACTGTGTCAGCAGAGGAGGCTGCTGATGAGTATGAGTTCGCCATCCGACAGCTGGTGAAAACCCGGGTGGTCAGTGTGTCAGAGATTAGTGACTGCCCAAAGTTTGATCTTATCCTTCTTGGATTAGGTCCTGATGGTCATGTTGCCTCTTTATTTCCTAATCACTCAGCACTCAATGAGAAGGAAGAATGGGTAACTTTCATCACTGATTCCCCAAACCGCCACCGGAGAGGATCACATTCACCTTGCCTGTTATCAATTCTGCATCAAACGTA | 623 | 0.4526 | MALSGGHKNRGELRVHESLDELKTDLADYIAEISEASVKERGVFAIALSGGSLIGLMGKLCEAPYNKTVDWSKWYIFWADERVVAKNHADSNYKLAKDGLLSKVPVIPSHVHSINDTVSAEEAADEYEFAIRQLVKTRVVSVSEISDCPKFDLILLGLGPDGHVASLFPNHSALNEKEEWVTFITDSPNRHRRGSHSPCLLSILHQT | 207 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bva11g00903 | 207 | Coils | Coil | 19 | 39 | - | - | |
| Bva11g00903 | 207 | CDD | 6PGL | 20 | 188 | IPR005900 | GO:0005975|GO:0006098|GO:0017057 | |
| Bva11g00903 | 207 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 13 | 190 | IPR037171 | - | |
| Bva11g00903 | 207 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE 1-RELATED | 1 | 189 | - | - | |
| Bva11g00903 | 207 | PANTHER | 6-PHOSPHOGLUCONOLACTONASE | 1 | 189 | IPR039104 | - | |
| Bva11g00903 | 207 | Gene3D | - | 8 | 204 | - | - | |
| Bva11g00903 | 207 | Pfam | Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase | 19 | 191 | IPR006148 | GO:0005975 | |
| Bva11g00903 | 207 | TIGRFAM | pgl: 6-phosphogluconolactonase | 15 | 193 | IPR005900 | GO:0005975|GO:0006098|GO:0017057 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bva11g00903 | Bva-Chr11 | 11260306 | 11263621 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bva11g00903 | K01057 | - | gmx:100806593 | 350.903 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bva11g00903 | 11 | 11260306 | 11263621 | Bva11g00903 | 11 | 11260306 | 11263621 | ECH |