Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00901 ATGAGAGTGTGTTCTAGCTCTGTATCAGATCCTTCTCTGAATTCTCTTTCATTCCACCCAAATCATGGGGGCACACTAAAACCCAGGATATTGTTTAATATAAGTGAACAAGCTAAGATGAATGCTCTGAAGAATCTTGTGTCCCCCAGACGTCAGATTTGTGCTGTGAGAAAGTATTTTAATGTATTGggattttcctttcttcacaCTACTCCTAATACCTCAGTGGAACTTCACTCACAAGATCAGGAAGTAGTGATTGCTTTGGGAAGTAATGTAGGCAATAGGATAAATAACTTCAATGAAGCCTTGAAGTTAATGAAGAAGTCAGGCATACACATCACAAGACATGCTTGTTTGTATGAGACAGCACCAGCATATGTGACTGATCAACCTCGTTTTCTCAATTCTGCAGTTAGAGCTGTTACTAAACTTGGGCCGCATGAATTATTGGCTGTgctaaaaaatattgagaaagaCCTTGGCCGTACGGATGGTATAAGGTATGGTCCAAGGCCAATTGATTTGGATATTCTATTCTTTGGTAAATTTAAGGTCAATTCCGACATTCTTACTGTACCTCATGAACGAATTTGGGAACGGCCATTTGTAATGGCCCCTTTGATGGATTTACTGGGATCAGAGGTAGAAAGTGATGTGATTGCTTGCTGGCATTCCTTTACAGGCCAATCTAGAGGACTCGCTGGAATATGGGAGAAACTAGGTGGTGAATCCCTTATTGGAGAGGAAGGCATGAAAAGGGTACTGCCTGTTTCAAATGGCTTACTAGACTGGTCACAGAAAACTTCTGTCATGGGTATCCTTAATTTGACCCCAGATAGCTTTAGTGATGGAGGCAAATTCCAGTCTGTGGAATCTGCTGTTTCTCAGGTTCGCCTGATGATTTCAGAGGGAGCAGATATGATTGACATTGGTGCTCAGTCAACAAGGCCAAAGGCCTCTAGGATCTCTGTTGATGAAGAATTGGGTAGACTAATCCCTGTCCTAGAAGCTATTAAGGCAATGCCTGAGATAGAGGGAAAGCTCATATCCGTGGATACTTTCTACTCTGAAGTTGCTTCAGAAGCAGTTAGCAGAGGAGCTCATCTTATAAATGATGTATCTGCAGGACAATTAGATTCTAATATGTTTAAGGTCATTGCAGATCTTGAAGTTCCTTATATTGCAATGCACATGAGGGGAGACCCTTGTACAATGCAGAATCCTGAGAACCTGCATTATGATAATGTTTGCAAGCAGGTTGCCTCTGAATTACACTCGAGGGTTAGAGAGGCAGAACTGTCAGGGATCCCAGCATGGAGGATTATTCTTGACCCTGGTATTGGATTCTCAAAGAAAACTGAAGACAATTTGGACATCCTCATAGGACTACCTGATATACGAGGAGAGATATCCAAGAAAAGCTTTGCCATCTCTCATGCTCCTATACTAATTGGACCTTCAAGAAAGAGGTTTCTAGGAGAAATTTGCTCTCGTCCTGCTGCAGATAAGAGGGATCCTGCTACCATTGCTTCTGTCACAGCTGGTATGCTAGGCGGGGCTAATATTGTTAGGGTGCATAATGTCAGAGATAATTTAGATGCTGTGAAGCTTTGCGACGCATTGCTGAGGCAGAAAAGTTCTTACATGCAATGTAGACAATG 1664 0.4135 MRVCSSSVSDPSLNSLSFHPNHGGTLKPRILFNISEQAKMNALKNLVSPRRQICAVRKYFNVLGFSFLHTTPNTSVELHSQDQEVVIALGSNVGNRINNFNEALKLMKKSGIHITRHACLYETAPAYVTDQPRFLNSAVRAVTKLGPHELLAVLKNIEKDLGRTDGIRYGPRPIDLDILFFGKFKVNSDILTVPHERIWERPFVMAPLMDLLGSEVESDVIACWHSFTGQSRGLAGIWEKLGGESLIGEEGMKRVLPVSNGLLDWSQKTSVMGILNLTPDSFSDGGKFQSVESAVSQVRLMISEGADMIDIGAQSTRPKASRISVDEELGRLIPVLEAIKAMPEIEGKLISVDTFYSEVASEAVSRGAHLINDVSAGQLDSNMFKVIADLEVPYIAMHMRGDPCTMQNPENLHYDNVCKQVASELHSRVREAELSGIPAWRIILDPGIGFSKKTEDNLDILIGLPDIRGEISKKSFAISHAPILIGPSRKRFLGEICSRPAADKRDPATIASVTAGMLGGANIVRVHNVRDNLDAVKLCDALLRQKSSYMQCRQ 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00901 554 ProSiteProfiles Pterin-binding domain profile. 269 537 IPR000489 GO:0042558
Bva11g00901 554 TIGRFAM DHPS: dihydropteroate synthase 271 541 IPR006390 GO:0004156|GO:0009396
Bva11g00901 554 ProSitePatterns 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 168 179 IPR000550 GO:0003848|GO:0009396
Bva11g00901 554 Gene3D - 251 548 IPR011005 GO:0044237
Bva11g00901 554 Pfam 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 86 211 IPR000550 GO:0003848|GO:0009396
Bva11g00901 554 Pfam Pterin binding enzyme 272 527 IPR000489 GO:0042558
Bva11g00901 554 CDD DHPS 269 540 IPR006390 GO:0004156|GO:0009396
Bva11g00901 554 Gene3D - 82 230 IPR035907 -
Bva11g00901 554 PANTHER FOLATE SYNTHESIS PROTEINS 73 543 IPR045031 GO:0004156|GO:0009396
Bva11g00901 554 CDD HPPK 85 211 IPR000550 GO:0003848|GO:0009396
Bva11g00901 554 SUPERFAMILY 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 85 215 IPR035907 -
Bva11g00901 554 TIGRFAM folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 85 211 IPR000550 GO:0003848|GO:0009396
Bva11g00901 554 ProSitePatterns Dihydropteroate synthase signature 2. 305 318 IPR000489 GO:0042558
Bva11g00901 554 PANTHER FOLIC ACID SYNTHESIS PROTEIN FOL1 73 543 - -
Bva11g00901 554 ProSitePatterns Dihydropteroate synthase signature 1. 271 286 IPR000489 GO:0042558
Bva11g00901 554 SUPERFAMILY Dihydropteroate synthetase-like 259 545 IPR011005 GO:0044237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00901 K13941 - gmx:100808899 837.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00901 11 11254152 11256408 Bva11g00901 11 11254152 11256408 ECH