Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00897 ATGTTTTCAATGCCTAGGCAATTCCTCTATTCTTGTCCCTCTTCTTTCTCATCTTCTTGCTCTTCATTGTTTCTTGCCACTCTTTTCCTCACGACTCAATTCTATGGCCTTGCTGTATCTGCCAACCATGAAgcctctcttctcttctcttggcTTCACAGTTCTGCTTCACCGCCCCCTTCATATTTTTCCAACTGGAATATCCTTGATACTAATCCATGCAATTGGAGCTCTATAACATGCTCCCTACAAGGCTTTGTCACTGAAATCAATACACAATCCATCCCTCTTGAGCTTCCTTTGCCTTCTAATCTtccttatttttcctttctccatAAGCTTGTCATTTCTGATGCTAATCTCACTGGCAGCATTCCTGCTAACATTGGTGATTGCTCCACTCTCATGGTCATTGACCTTAGCTCGAACAATCTTGCTGGGTCCATCCCTGCAAGTATTGGTAAGCTCCAAAACCTGGAGAGCTTGATTTTGAACTCTAATCAGCTCACTGGAAGAATTCCAGTTGAGCTGAGCAACTGCATTGGCCTGAAAACACTTCACCTTTTTGACAACCAACTAAGTGGGACTATTCCCACAGTGCTGGGAAAATTGTCAAAACTTGAGGTCCTCAGAGCAGGAGGGAACAAAGATATTGTTGGGAAAGTCCCAGATGAGCTTGGAGAATGCAGGAATTTGACTGTGTTGGGTTTAGCTGATACGCGAATTTCAGGCTCTCTTCCAGCTTCATTGGGTCAGCTCAGCAAGCTTCAGACATTGTCCATCTACACCACTATGCTATCTGGTGAAATTCCAACTGAGTTAAGTAACTGCTATGAGCTGGttgatttgtttttgtatGAAAATAGCCTATCTGGTTCTATTCCTCCTGAGCTTGGTAAGCTCCAAAAGTTGCAGCAGTTGTTTTTATGGGAGAATAGTCTAGTTGGGCCTATCCCAGTTGAGATTGGAAATTGCACAAGCTTGAGAAAAATTGATCTCTCTTTAAATTCTCTATCTGGAACAATACCTTTGTCTTTGGGTAAACTTTCAGAACTTGAAGAGTTTATGATtagtgataataatatttctggTTCAATACCTTCTAGTCTTTCAAATGCTACCAATCTGCAACAGTTGCAGGTTGACACAAACGAGCTCTCAGGTTTGGTTCCAGAAGAGCTTGGGCAGCTGTCAAAGCTCGCAGTGTTCTTTGGTTGGCAAAACCAACTTGAAGGAAGCATTCCTTCTAGTTTGGCAAACTGTAGTAACTTACAATCACTGGATTTATCTCACAACGCACTGACTTGTAGCATTCCCAGTGGCCTATTCCAGCTTCGAAACCTCACGAAACTGCTTTTGATTTCCAATGATATATCTGGTTCAATACCATCAGAAATAGGCAGTTGCAGCTCTCTTATAAGGTTGAGGCTTGGAAACAATAGGATAACTGGTCAGATTCCTAAGAGCATTGGCAGACTTAAAAGCTTAAACTTTTTGGATCTCTCTGAGAATCGCCTTTCTGGGCAAGTGCCTGATGAGATTGGAAGTTGCACAGAACTGCAAATGATTGACTTAAGCAGTAATAACCTTGAAGGTTCACTGCCTAATTCCTTATCATCACTATCTGGTCTGCAGGTATTGGATGTGTCTTCTAACAAATTTTCAGGTCAGATACCGGCTAGTTTGGGCCGCCTTGTTTCACTAAGCAAGCTAATCCTGGGAAGAAATTCATTCTCTGGACCAATTCCTCCATCACTAAGCCTGTGTTCAAGTCTCCAAATGCTTGACCTTAGTAGCAATAAGCTCACTGGAAGCATCCCAGCAGAGCTAGGCCATATTGAAACTCTTGAAATTGCTCTTAACCTTAGTTGCAATTCTCTCAGTGGTTCAATCCCAGCTCAGATATCTGCTCTTACCAAGCTTTCCATTTTGGATCTTTCACATAATCAGTTGGAAGGAGATTTGCTTCCACTAGCAGCGATAGATAATCTTGTCTCTCTCAATATTTCTTACAATAAGTTCTCTGGCTATCTTCCAGATAATAAGCTCTTTAGGCAGTTATCACCAAAAGATCTCACTGGAAATCAAGGGCTTTGCCCTTCAGGTCAGGACTCATGCTTCTTAAGTGATTCTAGCAAGACAGGAATAGCACTGAATGGAAATGAAGCGAGGAAGTTAAAAAGGCTGAAACTAGCAATTGGATTGCTGATAGTCTTAACAGTGCTAATGATGGCTATGGGGATAACTGCAGTGATAAAAGCAAGAAGAAGCATCAGAGATGATGACTCAGAATTAGGGGACTCATCACCATGGCAATTCATTCCACTCCAGAAGCTAAACTTCTCAATTGATCAAGTATTGAGATGTTTAGTTGATGGAAATATAATTGGAAAAGGCTGCTCCGGTGTTGTTTATCGCGCTGAAATGGACAATGGTGAAGTCATTGCTGTGAAGAAACTATGGCCAACAACAGTGGCTGCAGGGGATGGATATAAAGATGATAATAGTGGAACCCGTGACTCATTCTCAACTGAGGTGAAAACTCTTGGCTCAATCAGACATAAAAACATTGTGAGATTCTTGGGTTATTGCTGGAATCGAAACTCAAGATTGCTTATCTTTGATTATATGTCAAATGGGAGTCTGAGCAGTCTACTTCATGAAAGAACTGGAAATTTCCTGGAATGGAAACTTAGGTACAGAATCCTGTTAGGGGCTGCACAAGGCCTTGCATATCTGCACCATGACTGTGTCCCTCCTATAGTTCACAGAGACATCAAAGCCAACAACATCCTCATTGGCCTTCAATTTGAACCTTATATTGCTGACTTTGGCTTAGCTAAGCTTGTTGATGATGGTGATTTTGGTAGATCCTCCAATACAGTAGCTGGTTCCTATGGATATATAGCTCCAGAATATGGCTATATGACGAAGATCACGGAGAAAAGTGATGTTTATAGTTATGGAGTAGTATTACTAGAAGTCTTGACAGGCAAGCAACCGATTGATCCAACAATACCAGATGGTCTGCATATTGTTGATTGGGTAAGACAGAAAAGAGGCATTGAAGTTCTTGACCCAAGCTTGCTATCTAGACCAGAATCAGAAATAGAGGAAATGATGCAAGCATTAGGCATAGCCTTGTTATGTGTAAACTCAGCTCCTGATGAAAGGCCAACAATGAGAGATGTTGCAGCAATGCTTAAGGAGATTAGACATGAAAGAGAGgaatatgcaaaatttaatgtgCTTCTAAAAGGGTCGCCAGCAAATGGTGTAGATAGAGATAAAAACTTCAATGCAGCTCTGGCAGCATCTTCTTCAGTGCCAATAAAGCAAAGCATGTATCCAAGAAGTAATAACACATCATTCTCTGTAACTTCATA 3386 0.4034 MFSMPRQFLYSCPSSFSSSCSSLFLATLFLTTQFYGLAVSANHEASLLFSWLHSSASPPPSYFSNWNILDTNPCNWSSITCSLQGFVTEINTQSIPLELPLPSNLPYFSFLHKLVISDANLTGSIPANIGDCSTLMVIDLSSNNLAGSIPASIGKLQNLESLILNSNQLTGRIPVELSNCIGLKTLHLFDNQLSGTIPTVLGKLSKLEVLRAGGNKDIVGKVPDELGECRNLTVLGLADTRISGSLPASLGQLSKLQTLSIYTTMLSGEIPTELSNCYELVDLFLYENSLSGSIPPELGKLQKLQQLFLWENSLVGPIPVEIGNCTSLRKIDLSLNSLSGTIPLSLGKLSELEEFMISDNNISGSIPSSLSNATNLQQLQVDTNELSGLVPEELGQLSKLAVFFGWQNQLEGSIPSSLANCSNLQSLDLSHNALTCSIPSGLFQLRNLTKLLLISNDISGSIPSEIGSCSSLIRLRLGNNRITGQIPKSIGRLKSLNFLDLSENRLSGQVPDEIGSCTELQMIDLSSNNLEGSLPNSLSSLSGLQVLDVSSNKFSGQIPASLGRLVSLSKLILGRNSFSGPIPPSLSLCSSLQMLDLSSNKLTGSIPAELGHIETLEIALNLSCNSLSGSIPAQISALTKLSILDLSHNQLEGDLLPLAAIDNLVSLNISYNKFSGYLPDNKLFRQLSPKDLTGNQGLCPSGQDSCFLSDSSKTGIALNGNEARKLKRLKLAIGLLIVLTVLMMAMGITAVIKARRSIRDDDSELGDSSPWQFIPLQKLNFSIDQVLRCLVDGNIIGKGCSGVVYRAEMDNGEVIAVKKLWPTTVAAGDGYKDDNSGTRDSFSTEVKTLGSIRHKNIVRFLGYCWNRNSRLLIFDYMSNGSLSSLLHERTGNFLEWKLRYRILLGAAQGLAYLHHDCVPPIVHRDIKANNILIGLQFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMTKITEKSDVYSYGVVLLEVLTGKQPIDPTIPDGLHIVDWVRQKRGIEVLDPSLLSRPESEIEEMMQALGIALLCVNSAPDERPTMRDVAAMLKEIRHEREEYAKFNVLLKGSPANGVDRDKNFNAALAASSSVPIKQSMYPRSNNTSFSVTS 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00897 1128 Pfam Leucine Rich Repeat 423 441 IPR001611 GO:0005515
Bva11g00897 1128 Gene3D Transferase(Phosphotransferase) domain 1 877 1086 - -
Bva11g00897 1128 SUPERFAMILY Protein kinase-like (PK-like) 772 1068 IPR011009 -
Bva11g00897 1128 Gene3D Ribonuclease Inhibitor 40 200 IPR032675 -
Bva11g00897 1128 Pfam Leucine rich repeat N-terminal domain 42 82 IPR013210 -
Bva11g00897 1128 SMART serkin_6 790 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00897 1128 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 21 1126 - -
Bva11g00897 1128 Gene3D Ribonuclease Inhibitor 201 403 IPR032675 -
Bva11g00897 1128 SUPERFAMILY RNI-like 114 508 - -
Bva11g00897 1128 Gene3D Phosphorylase Kinase; domain 1 776 876 - -
Bva11g00897 1128 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 21 1126 - -
Bva11g00897 1128 ProSiteProfiles Leucine-rich repeat profile. 423 445 IPR001611 GO:0005515
Bva11g00897 1128 SMART LRR_typ_2 349 373 IPR003591 -
Bva11g00897 1128 SMART LRR_typ_2 589 613 IPR003591 -
Bva11g00897 1128 SMART LRR_typ_2 156 180 IPR003591 -
Bva11g00897 1128 SMART LRR_typ_2 301 325 IPR003591 -
Bva11g00897 1128 SMART LRR_typ_2 541 565 IPR003591 -
Bva11g00897 1128 SMART LRR_typ_2 493 517 IPR003591 -
Bva11g00897 1128 SMART LRR_typ_2 638 663 IPR003591 -
Bva11g00897 1128 SMART LRR_typ_2 421 445 IPR003591 -
Bva11g00897 1128 ProSitePatterns Protein kinases ATP-binding region signature. 796 819 IPR017441 GO:0005524
Bva11g00897 1128 Gene3D Ribonuclease Inhibitor 405 714 IPR032675 -
Bva11g00897 1128 SMART LRR_sd22_2 349 375 - -
Bva11g00897 1128 SMART LRR_sd22_2 517 546 - -
Bva11g00897 1128 SMART LRR_sd22_2 638 666 - -
Bva11g00897 1128 SMART LRR_sd22_2 421 450 - -
Bva11g00897 1128 SMART LRR_sd22_2 589 610 - -
Bva11g00897 1128 SMART LRR_sd22_2 156 177 - -
Bva11g00897 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Bva11g00897 1128 PRINTS Leucine-rich repeat signature 638 651 - -
Bva11g00897 1128 PRINTS Leucine-rich repeat signature 592 605 - -
Bva11g00897 1128 Pfam Protein kinase domain 793 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00897 1128 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Bva11g00897 1128 SUPERFAMILY L domain-like 391 705 - -
Bva11g00897 1128 Pfam Leucine rich repeat 111 169 IPR001611 GO:0005515
Bva11g00897 1128 Pfam Leucine rich repeat 471 530 IPR001611 GO:0005515
Bva11g00897 1128 ProSiteProfiles Protein kinase domain profile. 790 1076 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00897 Bva-Chr11 11239145 11242631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00897 40 1073 Receptor kinase-like Gene Family AT5G56040 49.285 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva11g00897 Pkinase 3.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00897 - - gmx:100818541 1721.44