Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00895 ATGAACCTTGAGGAGAAAATTACCATGGACGTGGTTCCACCCTATGAGCAGCACCTCTGTTATGTGCGTTGCAACTTTTGCAACACTGTGCTTATGGTTGGCATTCCATGCAAGAGGCTGCTGGACACTGTGACAGTGAAGTGTGGTCACTGCAGTAATCTCTCCTTTCTCAACAACAAACCTCCATCACAAAACCAAAGCGTTGATCACTCACTCACTCTTCAGCAGGGATTTTACAGTGATTCCAAGAAGGGTCAAGCCttatcttcttcctcctcatcAACATCTAGTGAGACAGTGTCCCCTAAAGCAGCACCTTTTGTTGTAAAACCACCTGAGAAGAAACACAGACTCCCTTCTGCTTACAACCGCTTCATGAAGGAGGAGATACAGCGCATCAAAGCAGCCAACCCTGAGATCCCACACCGAGAAGCTTTCAGCTCTGCAGCTAAAAATTGGGCTAGGTACATTCCAAATTCACTAACCAGTTCACTCTCTGGAAGCAACATTAACGAATG 518 0.4459 MNLEEKITMDVVPPYEQHLCYVRCNFCNTVLMVGIPCKRLLDTVTVKCGHCSNLSFLNNKPPSQNQSVDHSLTLQQGFYSDSKKGQALSSSSSSTSSETVSPKAAPFVVKPPEKKHRLPSAYNRFMKEEIQRIKAANPEIPHREAFSSAAKNWARYIPNSLTSSLSGSNINE 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00895 172 PANTHER PROTEIN CRABS CLAW 7 168 - -
Bva11g00895 172 MobiDBLite consensus disorder prediction 83 102 - -
Bva11g00895 172 SUPERFAMILY HMG-box 100 154 IPR036910 -
Bva11g00895 172 MobiDBLite consensus disorder prediction 83 115 - -
Bva11g00895 172 Gene3D High mobility group box domain 96 160 IPR036910 -
Bva11g00895 172 PANTHER PROTEIN YABBY 6-RELATED 7 168 IPR006780 GO:0007275
Bva11g00895 172 Pfam YABBY protein 16 156 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00895 Bva-Chr11 11229435 11230792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00895 1 169 C2C2-YABBY Transcription Factor Family AT1G69180 65.497 3.79e-67 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bva11g00895 YABBY 4e-55 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00895 K25796 - gmx:100795791 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00895 11 11229435 11230792 Bva11g00895 11 11229435 11230792 ECH