Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00881 ATGAGAGCAGGGAAGGGTAATCTGGAAGAAGACGATTATGAGGAGGATGAGTTCGGTTCTAAGAAAGAAGGCCCCTCGTCTGCGCCTAACAGCAGCAATAGCAACAAAGATACAAAAGCTGTGGATAAGGCTAGTACAACAAGGTCAAAGCATTCAGTAACTGAGCAGCGAAGAAGGAGCAAGATAAATGAGAGATTCCAGATATTGAGGGATCTCATACCTCATAGTGATCAGAAGAGGGACACAGCATCATTCCTTTTAGAGGTGATTGAGTATGTTCAGTACTTACAGGAGAAGGTACAAAAGTATGAAGGATCATATCAAAATTGGAGTCAAGAGCCCACAAAGTTGATGCCATGGAGAAACAGTCACTGGCGTGTTCAGAGCTTTGTCGGTCAACCTCAAGCCGTAAAGAATGATTCTGGTCCAGTATCACCTTTCCCGGGGAAGTTTGACAAGAATAACATCAGTATCTCTCCAGCTATTCTCAGTGCCACCCAGAATATGATAGATTCTGAACAGAGCAGAGATATTGTCAGCAAAACAGCAGAGACGCAGCCTGAATTAGCTGGCAAGGGAATGCCACTGCCCATGCCTATGCATGCTGTTCCTGTGAGAAGTGATGGTGCACTTGCCCATTCTCTGCAGGGCCCTGTTTCTGATGCACAATCAACCGAGCATCCAATCACAAGTGTATCACATAATCAACAGGATGAACTGGCAATTGAAGGAGGCACAATTAGCATCTCAAGTGCATACTCCCAAGGGTTGTTGAACAATTTGACTCAAGCGCTACAGAGTGCTGGTTTAGATTTGTCGCAGGCTAGCATCTCAGTTCAGATTAATCTTGGGAAGCGGGCAAACACAGGACCGAGCAGTGGCACACCTGCTCACCAGAATCATGATAATCCCCTTTCTAGCAATCTAGGAATGGCACATTTTAGAGACGCCGGCAGCGGAGAAGACTCGGATCAAGCTCAGAAGCGGCTGAGAACATA 998 0.4609 MRAGKGNLEEDDYEEDEFGSKKEGPSSAPNSSNSNKDTKAVDKASTTRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQNWSQEPTKLMPWRNSHWRVQSFVGQPQAVKNDSGPVSPFPGKFDKNNISISPAILSATQNMIDSEQSRDIVSKTAETQPELAGKGMPLPMPMHAVPVRSDGALAHSLQGPVSDAQSTEHPITSVSHNQQDELAIEGGTISISSAYSQGLLNNLTQALQSAGLDLSQASISVQINLGKRANTGPSSGTPAHQNHDNPLSSNLGMAHFRDAGSGEDSDQAQKRLRT 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00881 332 Coils Coil 93 113 - -
Bva11g00881 332 MobiDBLite consensus disorder prediction 286 332 - -
Bva11g00881 332 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 45 119 IPR036638 GO:0046983
Bva11g00881 332 MobiDBLite consensus disorder prediction 24 40 - -
Bva11g00881 332 Pfam Helix-loop-helix DNA-binding domain 48 97 IPR011598 GO:0046983
Bva11g00881 332 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 96 IPR011598 GO:0046983
Bva11g00881 332 MobiDBLite consensus disorder prediction 286 307 - -
Bva11g00881 332 MobiDBLite consensus disorder prediction 41 59 - -
Bva11g00881 332 PANTHER TRANSCRIPTION FACTOR BIM2 1 332 - -
Bva11g00881 332 MobiDBLite consensus disorder prediction 317 332 - -
Bva11g00881 332 MobiDBLite consensus disorder prediction 1 59 - -
Bva11g00881 332 CDD bHLH_AtBIM_like 45 121 - -
Bva11g00881 332 Gene3D - 43 118 IPR036638 GO:0046983
Bva11g00881 332 SMART finulus 52 102 IPR011598 GO:0046983
Bva11g00881 332 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 332 IPR044295 GO:0003700|GO:0006351|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00881 Bva-Chr11 11134458 11138101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00881 1 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 57.530 4.43e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva11g00881 HLH 1.3e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00881 - - lang:109361152 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00881 11 11134458 11138101 Bva11g00881 11 11134458 11138101 ECH