Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00869 ATGGGTGACAGAGAAAATTTTGAGCTTGATAGAAACGGGGATTCTATGAATTATTCAACTGTTATGCCTTCTGATTGGCGATTTGGGGGTGCTCACCTTGCAAATGCTTCTTTGCGTGTGGTTCCCATGGAAAATTCAGTGGCTGTTAGCAGAGGGGATCTAATTGGTTCTTCTTCATGTTCCTCCGCTTCCATGGTGGACTcacttggtccaaacttctggGACCACCATTCCAATGCCCAAAACTTGGGATTTTGTGAAATTAATGTGCAGAATAATGGTAGCTCTTCAAACCCAAATGGTATCAGGAAAGATGGTCTTGCCCTTCCAAGAGCTGGTATTGATAGAACACTTGAAATGGGTTGGAACCCAGCAAATTCTATGTTGAAAGGGGATGTCTTTTTACCGAATGGGCAAGGGATGTTTCCACAGAGTTTATCTCAGGTTCCAACTGATTCTGCATTTATTGAGCGTGCTGCAAGATTCTCATGCTTTAGTGGAGGGAACTTTGGTGATATGGTGAACTCATTTGGGATTCCCCAGTCCATGGGTTTATATGTTAGGAGTGGGGGTATAATGCCTAGAACACCAGATGTTCTTGCTGGCCATGGATTAAAATCACCATCTGGAGGACAATCTCAAGGAAATGATCTAAATGTGGGTGAAGCTGCCAAAGATGTGTCTCCATCTGTTGAGCGTGTGGGTGTGGCTACTGAAGGAAGCCCACtcaagaatgaaaaaagaggTGAGAGCTGTCTATTATCTCAAGATGAAGCAAAACATGCTATAGGTAGGTCTAATAATGAGTTTGATGGAGCTGAATCTAGTGGTGATGATGGTGCTGGTGGTCAAGATGATTCCCGGACAATGGAGGGTTCAAGTGGGGAACCTTCTGCGACAGGACTGAActcaaagaaaaggaaaagaaatgggCAGGATCCTGATAATGATAAAGCAAAAGGACCTCATGAATTACCAAGTGAAGCTGCAAAGGACAATTCTGAGGGTCGACAGAAGGGAGACCAACAACCAACTTCAACAACCAAGGCTACTGGTAAGAATGCTAAACTGGGGTCTCAAGCTTCTGATCCTCCAGAAGAGGAATACATACATGTTAGGGCTCGCCGTGGTCAAGCAACAAATAGCCATAGCCTTGCAGAGAGAGTAAGGAGGGAAAAAATCAGTGAAAGGATGAAATTTCTTCAAGACCTTGTACCTGGATGCAGCAAAGTCACTGGCAAGGCAGTGATGCTAGACGAAATCATTAACTATGTACAGTCACTTCAACGGCAGGTTGAGTTTTTGTCTATGAAACTTGCAACAGTAAATCCACGACTGGATTTTAACATAGAAGGACTTCTCGCTAAAGATATGCTCCAGCAACGGCCTGGCTCTTCCTCTGCACTGGGTTTTTCTCCAGATATGTCCATGGCATTTCATCCATTACATCCATCTCAACCGGGACTTATTCAGTCGAGTCTTTCTGGCATGGCAAACTCATGTGATATACTTCGGAGAACCATTCATCCACAATTGGCACATTTCACCGGAGGATTGAAGGAACCTAATCAGCTACCTGATGTCTGGGAGGATGAACTTCACAATGTTGTGCAGATGAGCTATGCAACTACTGCTCCCATGAGTAGCCAAGACGTGGATGATTCTGCACCAACAGGTCAGATGAAAAACTG 1691 0.4287 MGDRENFELDRNGDSMNYSTVMPSDWRFGGAHLANASLRVVPMENSVAVSRGDLIGSSSCSSASMVDSLGPNFWDHHSNAQNLGFCEINVQNNGSSSNPNGIRKDGLALPRAGIDRTLEMGWNPANSMLKGDVFLPNGQGMFPQSLSQVPTDSAFIERAARFSCFSGGNFGDMVNSFGIPQSMGLYVRSGGIMPRTPDVLAGHGLKSPSGGQSQGNDLNVGEAAKDVSPSVERVGVATEGSPLKNEKRGESCLLSQDEAKHAIGRSNNEFDGAESSGDDGAGGQDDSRTMEGSSGEPSATGLNSKKRKRNGQDPDNDKAKGPHELPSEAAKDNSEGRQKGDQQPTSTTKATGKNAKLGSQASDPPEEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEGLLAKDMLQQRPGSSSALGFSPDMSMAFHPLHPSQPGLIQSSLSGMANSCDILRRTIHPQLAHFTGGLKEPNQLPDVWEDELHNVVQMSYATTAPMSSQDVDDSAPTGQMKN 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00869 563 SMART finulus 384 434 IPR011598 GO:0046983
Bva11g00869 563 MobiDBLite consensus disorder prediction 302 338 - -
Bva11g00869 563 Gene3D - 375 448 IPR036638 GO:0046983
Bva11g00869 563 MobiDBLite consensus disorder prediction 287 301 - -
Bva11g00869 563 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 378 428 IPR011598 GO:0046983
Bva11g00869 563 MobiDBLite consensus disorder prediction 339 358 - -
Bva11g00869 563 MobiDBLite consensus disorder prediction 198 251 - -
Bva11g00869 563 Pfam Helix-loop-helix DNA-binding domain 381 429 IPR011598 GO:0046983
Bva11g00869 563 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 376 447 IPR036638 GO:0046983
Bva11g00869 563 MobiDBLite consensus disorder prediction 267 367 - -
Bva11g00869 563 CDD bHLH_AtBPE_like 368 453 - -
Bva11g00869 563 PANTHER BHLH TRANSCRIPTION FACTOR 10 561 - -
Bva11g00869 563 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 10 561 IPR024097 GO:0006355
Bva11g00869 563 MobiDBLite consensus disorder prediction 544 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00869 Bva-Chr11 11085633 11089717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00869 11 541 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68920 46.097 1.30e-127 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva11g00869 HLH 7.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00869 - - gmx:100797720 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00869 11 11085633 11089717 Bva11g00869 11 11085633 11089717 ECH