Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00857 ATGGCCCCTCAAGGTTCCTCTGATTCTGATTCACATCGACGTGCGGGTCTCCTGAAAGATCAAGTTCGTTTGGCGAAAAGGAAAGACTTGGATCGCTATGAGATTGCCGCAATCCAAGATAATCTATCATTTGAGAAGGGTTTCTTTATAGTTATCCGTGCCTGCCAATTATTGGCCCAAAAGAATGAGGGAATAATATTGGTAGGGTTGGCAGGTCCTTCAGGGGCTGGGAAGACTGTATTCACAGAGAAGATACTCAATTTCATGCCTAGCATTGCAGTCATTTCAATGGATAATTACAATGATTCCAGCCGAATTGTTGATGGAAACTTTGATGATCCGCGCTTGACAGACTATGACACATTGCTCCAGAATGTCCAAGATTTAAAGGCTGGAAAGCCAGTCGAGGTTCCAATCTATGATTTCAAGTCCAGCTCACGTACAGGATACAGGACACTTGAAGTCCCAAGCTCCCGAATTGTGATTATAGAGGGAATATATGCTTTGAGTGAGAAGTTGCGACCTCTACTGGACCTTCGAGTATCTGTAACGGGTGGAGTTCACTTTGACCTTGTCAAAAGAGTTATTCGTGACATACAACGTGCGGGTCAAGAACCTGAAGAAATTATTCATCAAATTTCTGAAACGGTATATCCAATGTACAAGGCCTTTATAGAGCCAGATCTTCAGACAGCACATatcaaaatcatcaacaagTTCAATCCATTTACTGGGTTCCAGAGTCCTACTTACATATTAAAGTCAGCAAGGGAAATATCAGTGGATCAAATTAGAGCTGTTCTCTCTGAAGATTTCAAGGAGTCAACGGAGGAGACTTATGACATATATCTTCTACCACCTGGTGAAGATCCAGAAACCTGCCAATCATATTTACGGATGCGGAATAAGGATGGGAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATAATCCATTTGTCATATCACCGAGAATCACTTTCGAGGTCAGTGTTCGCCTTCTTGGTGGACTAATGGCCCTGGGATACACGATAGCTACCATCCTTAAAAGAAACAGCCAAGTATTTTCTGATGATAGGGTTTTTGTGAAGCTTGATTGGCTTGAGCAGCTTAATAGGCATTATGTTCAGGTGCAAGGAAGAGATCGCTTAGTTGTAAAATGCATAGCAGATCAGCTGGGTCTAGAAGATTCCTATATTCCTCGTACCTACATTGAGCAAATTCAGCTCGAGAAGCTTGTGGATGAAGTTATGGCTCTGCCAGATGATTTAAAGTCGAAGTTCAGCCTTGATGAGGATTTGGTGACAAGCCCCAATGGAACACTTTCAAGAACCTATGTAGAAAGGGTTGCCATGAGAGATAAGAATATGAGGAGTGGTATGTCCCAATCATATACGACTCGAAGGGACAAGAATCAAGCCAAACTTAGTGTATACAATAACCGTCATGGGTTTGGGGAAAGAAATCCAGATTCCTCCACTACAGTAGCAAACCAGGGAGCTATGAATCAACTTTCAGAACAAATTTCTTCACTCAATGATAGGATGGATGAGTTTACAAACCGTGTTGAAGAGCTGAACTCCAAGCTAACTATCAAGAAAAGTTCTCCTAGCCAACAAAATATGGCACTCCAAGCTGAAGCTTGCAACGGTTCAGCTCCCACCTCTCACTTCATCACTAGTTTGGGAAATGGTGCCCTAACTGGTTCTAGAATGCCAAGTTCCTCATTGTCATCACAATTGGCTAAAGAGTCTCCTTTAGCAGAAGAGATATCAAGTATTCCGCGGAGTCAGCGTCAGATCATTCATCAATTGGACAATCTCAACAATCTTCTGCGGGCAAGTTTGGGAGAGAGGTCTCAGCAAATGAGAACcaacaagaaaaacataaatgcTGCTGATTCAGAATTCACTGCAGTTCGAGTTACCTTGACAGCAGTGGCCATTGGTTGTTTTGGGATATTCTTAATGAAGGGTTTGTACTCCAGAAATTG 1994 0.4183 MAPQGSSDSDSHRRAGLLKDQVRLAKRKDLDRYEIAAIQDNLSFEKGFFIVIRACQLLAQKNEGIILVGLAGPSGAGKTVFTEKILNFMPSIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVQDLKAGKPVEVPIYDFKSSSRTGYRTLEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSAREISVDQIRAVLSEDFKESTEETYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSQVFSDDRVFVKLDWLEQLNRHYVQVQGRDRLVVKCIADQLGLEDSYIPRTYIEQIQLEKLVDEVMALPDDLKSKFSLDEDLVTSPNGTLSRTYVERVAMRDKNMRSGMSQSYTTRRDKNQAKLSVYNNRHGFGERNPDSSTTVANQGAMNQLSEQISSLNDRMDEFTNRVEELNSKLTIKKSSPSQQNMALQAEACNGSAPTSHFITSLGNGALTGSRMPSSSLSSQLAKESPLAEEISSIPRSQRQIIHQLDNLNNLLRASLGERSQQMRTNKKNINAADSEFTAVRVTLTAVAIGCFGIFLMKGLYSRN 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00857 664 Gene3D - 256 413 - -
Bva11g00857 664 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Bva11g00857 664 CDD UMPK_like 67 239 - -
Bva11g00857 664 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 236 IPR027417 -
Bva11g00857 664 PRINTS Uridine kinase signature 188 198 - -
Bva11g00857 664 PRINTS Uridine kinase signature 132 147 - -
Bva11g00857 664 PRINTS Uridine kinase signature 224 237 - -
Bva11g00857 664 PRINTS Uridine kinase signature 65 82 - -
Bva11g00857 664 SUPERFAMILY CYTH-like phosphatases 260 407 IPR033469 -
Bva11g00857 664 Coils Coil 502 529 - -
Bva11g00857 664 Gene3D - 66 248 IPR027417 -
Bva11g00857 664 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Bva11g00857 664 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 7 643 - -
Bva11g00857 664 Pfam CYTH domain 269 404 IPR023577 -
Bva11g00857 664 PANTHER URIDINE KINASE 7 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00857 Bva-Chr11 11017552 11024452 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00857 66 236 PRT Gene Family AT5G40870 26.667 1.07e-17 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00857 K00876 - gmx:100781286 1059.28