Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00839 ATGATTCTTGATAAGAATGCCATTCAGGAAACCCATTATGATGTTCTTAACGTTAAGGAAGATTCAAGCTATGAAGAAATCCGTGCTAGTTACCGTAGTGCTATTGTCAATTTACATCCAGACAAGTTATTGAAGACGTCCGAGGCATCCATCAATGATCAAGCAGCAGGAGAAAGATTTATCAAAGTACAAAAGGCTTGGGAGATTCTCAGCAATTCAAGTTCCCGCTTGGCTTATGATAATGAGCTGCGAGGTTCGAGGCAGGATATCTTAGCTGCTGATGTTGCAGAAGATATAAGGATAGAGGATATGACAGCTGAAGATGCAGGAGAAGCATTTGAGCTCCTTTACCAGTGCCGTTGTGGCGATTACTTCTCCATAGATTCTTTGGAATTGGAGAAAATGGGGTATTCATTGTTGAGGGATGGAACTGGGATTTCTTTACAGACTGGTTATGCTTTACCAGGATCAGTGATTCTTCCCTGTGGATCTTGTTCTCTAAAAGCTCGCCTAGTAATCGATACGAATGCCTA 533 0.4165 MILDKNAIQETHYDVLNVKEDSSYEEIRASYRSAIVNLHPDKLLKTSEASINDQAAGERFIKVQKAWEILSNSSSRLAYDNELRGSRQDILAADVAEDIRIEDMTAEDAGEAFELLYQCRCGDYFSIDSLELEKMGYSLLRDGTGISLQTGYALPGSVILPCGSCSLKARLVIDTNA 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00839 177 SMART dnaj_3 10 75 IPR001623 -
Bva11g00839 177 Pfam DnaJ domain 11 80 IPR001623 -
Bva11g00839 177 PANTHER DIPHTHAMIDE BIOSYNTHESIS PROTEIN 4 1 175 - -
Bva11g00839 177 Pfam CSL zinc finger 98 173 IPR007872 -
Bva11g00839 177 Gene3D DnaJ domain 2 88 IPR036869 -
Bva11g00839 177 Gene3D DPH Zinc finger 89 177 IPR036671 -
Bva11g00839 177 PANTHER DPH3 HOMOLOG-RELATED 1 175 IPR044248 GO:0017183|GO:0046872
Bva11g00839 177 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 95 174 IPR007872 -
Bva11g00839 177 SUPERFAMILY Chaperone J-domain 10 84 IPR036869 -
Bva11g00839 177 CDD DnaJ 11 72 IPR001623 -
Bva11g00839 177 SUPERFAMILY CSL zinc finger 96 174 IPR036671 -
Bva11g00839 177 ProSiteProfiles dnaJ domain profile. 11 83 IPR001623 -
Bva11g00839 177 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Bva11g00839 177 PRINTS DnaJ domain signature 31 46 IPR001623 -
Bva11g00839 177 PRINTS DnaJ domain signature 55 75 IPR001623 -
Bva11g00839 177 PRINTS DnaJ domain signature 13 31 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00839 Bva-Chr11 10937077 10939257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00839 12 94 C2H2 Transcription Factor Family AT1G74250 39.759 1.40e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00839 K17867 - gmx:100814856 268.085