Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00800 ATGATTATGAAGTACCTAGCTCTAGTTCTAGCCCAGCTGAAATGGGCACTAGATTTTCTCCTCTACCACTCTTTCTATAAGCTTTGTAAACCTGAGATGCCAACACTTAGAAGAGAACTGAAGGTTTGCCAGTATGAGCCAAACCCTAGCTCTGATGAAGAAATGGATTGTGCTGTGTGCCTCTGCAAGATCAGGGAAGGTGAAGAGATTAGTGTGCTGAGGTGTGAGCATTTCTTCCACaggatttgtttggatttggaGAGATGGGTTGGTTTCAATGTCAATTATGCTGCGTGCCCTATTTGCAGAGAGCTTCCAGGTCAGTGCAGGGAAATTACTGAGCTTGGAGCTGAGGTGATACGCCTTCAAGTTTGGTCTTTCAGTTCTAGAGACCGTGAGAGATGGTGGCTACGCTA 416 0.4375 MIMKYLALVLAQLKWALDFLLYHSFYKLCKPEMPTLRRELKVCQYEPNPSSDEEMDCAVCLCKIREGEEISVLRCEHFFHRICLDLERWVGFNVNYAACPICRELPGQCREITELGAEVIRLQVWSFSSRDRERWWLR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00800 138 SUPERFAMILY RING/U-box 51 106 - -
Bva11g00800 138 ProSiteProfiles Zinc finger RING-type profile. 57 103 IPR001841 -
Bva11g00800 138 Pfam Ring finger domain 56 103 IPR001841 -
Bva11g00800 138 PANTHER RING ZINC FINGER PROTEIN-RELATED 2 133 - -
Bva11g00800 138 SMART ring_2 57 102 IPR001841 -
Bva11g00800 138 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 2 133 - -
Bva11g00800 138 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 107 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00800 Bva-Chr11 10678757 10679173 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00800 34 103 C3H Transcription Factor Family AT4G33565 39.437 8.89e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00800 K16282 - vvi:104878972 120.168