Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00725 ATGGGCCTCGCTGAAAGCCCAGGTAAAGGAGTGGGCCTCGCTGGAAGCCCAGGTCAAGGAGAGGCTCCGCTGAAAGCCCAAATGAATGAGTGGGCCTCGGTTGAAGCTCAAGGGAAGGGTGGGCCTCGTTTGAAGCCGAAGGGAAAAAGTGGGCCTCGCTTGAAGCCCAAAAGCTCTACAAGCTCTAAGAGAACTTATCATATTCCCACTTCACTATTCTCGCTAAGCTCAGATGCTCGGTCTCAAATGGCCTTGAGAGTTGCTGCTATATGGTCCACCAGACACGGGAAAGTGTCAATTTTGCTGCCTGATCAGTGTGGCATTAGTATGTCTACAATGGCCGCTGCTGCTATTATGCTATACTTCAAAGTTGTTGTTGAATTATGTAAATATGGTGCTTTTATGTTGTACTTCAAATCGTTTTGTTTTGCTGATTCCAATTTATTCTATCACATATATGCCCAAATGCAGACAAGTTTGGTGCGGGCAGTTGTTCAAGAATGTGGGGCACATTTGAATATTATCAGTCCACATTCTGTTCATGGAGCCCATGCTGGTGAAAGTGAGCGAATTCTACGGGAGGCTTTTGCAGAGGCATCATCACATGCAGCTTTGGGCAAGCCAtctgttatttttatagatgAAATAGATGCACTCTGTCCTCGACGTGATTCCAAAAAGGAGCAAGATATCCGAGTTGCATCCCGGCTTTTCACACTGATGGACTCAAACAAACCTCTTCTATGCCAGGAGTTGTATTTTAGTGATGACATTCTTGAGACACGGAAATTTGAAGTATACTTAGACTTCTTTCAGTCATCCTGGAAGAAGACTGAAGATTTAGGGGATCGAATGCTCTTCCTTGGAAAATGCTATTCAATGTCATTCTCTGCAAAAGAACTTGGAGTTGGAATGAGCAACactatttatttctctaatgATCCAGTTGCCCCTTGGTGGAATGAATGGGATTCTTATCATTTAAGAGGTATCAGCACATCTTGGCTTACATACGGTTA 1019 0.4318 MGLAESPGKGVGLAGSPGQGEAPLKAQMNEWASVEAQGKGGPRLKPKGKSGPRLKPKSSTSSKRTYHIPTSLFSLSSDARSQMALRVAAIWSTRHGKVSILLPDQCGISMSTMAAAAIMLYFKVVVELCKYGAFMLYFKSFCFADSNLFYHIYAQMQTSLVRAVVQECGAHLNIISPHSVHGAHAGESERILREAFAEASSHAALGKPSVIFIDEIDALCPRRDSKKEQDIRVASRLFTLMDSNKPLLCQELYFSDDILETRKFEVYLDFFQSSWKKTEDLGDRMLFLGKCYSMSFSAKELGVGMSNTIYFSNDPVAPWWNEWDSYHLRGISTSWLTYG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00725 339 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 245 IPR027417 -
Bva11g00725 339 Pfam ATPase family associated with various cellular activities (AAA) 158 246 IPR003959 GO:0005524|GO:0016887
Bva11g00725 339 Gene3D - 157 259 IPR027417 -
Bva11g00725 339 MobiDBLite consensus disorder prediction 1 64 - -
Bva11g00725 339 CDD AAA 158 248 - -
Bva11g00725 339 PANTHER AAA-FAMILY ATPASE 148 244 - -
Bva11g00725 339 Pfam Protein of unknown function (DUF295) 277 315 IPR005174 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00725 Bva-Chr11 10214951 10218224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00725 157 242 Calmodulin-binding Proteins AT3G56690 33.333 2.98e-07 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00725 - - lja:Lj1g3v4435520.1 165.622