Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00708 ATGGGAAACAAAACTTCACCTTCACCTTCACCATCAACcattcctctctttctctcttctttgttgtTCCTTCTCTTAAGCACTAAAGCTCAGGCCAAAGATGACCAACCTTATTATTGCTACTCTTCATGTGGAAGTTTACAAGATATTAGATACCCTTTTCGCCTAAGAGGCCAACCATTAAGCTGTGGTGATCCAGATTACACACTAACATGTGAGAACCAGAAGCCTATCCTTGAATTTGGAGATGGAAAATACTATGTCAAGTCAATTAACTACGAAAACCAGACGATTCAACTTGTTGATGTCAACTTAGCCAATGGAAGTTGCAACCTGCCATCAGGCACAGTTGATTTATTTCATACTGACATTCGTTACCAAAGATATTTTCCCCACACAGAAATAAGCTTTGTGAATTGCTCGAAACCCATAAATGATTCCACTTTCAAAAGGGTTCCTTGTATGAGTGGAAATGAGTCCATCATTTACGCAGTTTATAGTGGTGCCAGTGTATATGATTATCAAAAGTCATGCTCTTTCCCAATTTCAACGAGTCTCATCGATGATGACTATGGTTCCAAGCAGCCTTCTTCTTATGAAGATATTCATAAGCTTCTGCAGAATGGATTTAAGCTTGGATGGTCAGTAGAATGCAGGGATTGTGCTCTTTCTGGCCTTGAATGTGGATACAATGACAGTGATCCTAAACCACATTACAGTTGCTACAAACCATATAATGAATATGATGAAGTGATTCATGCTTACATAATTCTCAGTATTATAATAGTATCTGgactattttttcttgttatactGGTTTGCCTTGTGATCAGATGCATTGTCAAGAGGAGGGCAAGGAAAAATGGGGAGAAATTTTACCAATCCTTGAACCTGAAAAGGTACACTTACAATGATATTACTTCAGTGACAAACAATTTTGCAGATAAATTGGGGAAAGGCACTTTTGGTTCAGTTTACAAAGGAAAACTTGCTGATGGTGACTTAGTTGCTGTCAAAATGCTTGAGAAGTGCAAGATCAGTGAGAAAGATTTCCAGAATGAAATTGCAAAGATTTGTGGAACAAGTCATCCCAATCTGATAAAGTTGGTGGGTGTTTGCTCCGATGTTTCGAAAAGAGCACTCGTGTATGAATTCATGCCTAATGGTTCACTTGATGAGTATCTCTTGACAAAGGGAGAGACTAAGTCATCAAGTTTGGATCAGCTACAAGAGATTGCTCTTGGAGCTGCCAAAGGGATTCATCATCTGCATACAGCAACTGATCCATGCATTCTTCATCTTGACATTAAGCCAAAAAATATCCTTCTAGACCAAAATTTCATCCCAAAAGTTTCAGATTTTGGACTCAGAAAGATTTATGCAAAGGATTATAATTTTGTGGCAATGAATTCGGCTAAGTACATAGCACCAGAATTGAAGCTGAATTATGCAGCAGCTACTACAGAATCTGATGTCTATAGTTTTGGATTGACATTGCTGGAAATGGTTGGGAAAGTAAAGAATTCAGATTCAGGTTCAAGTACTGAAGCATATTCTATATCAGGTATTTATGAGAATCTAAGTAAGGGAGAAGACTTGGAGGTTGGGAATTTGACAGAAGGTGAAGGTAGAATAGCAAGGAAGTTGTCCATGACAGGATTATGGTGCATCCAAGTGAACCCATCTGAGAGACCTTCAATGTCCAAAGTGGTGGAAATGTTGGAACATGGCACTGATGACTTCCCAAGTGCCCCCTA 1757 0.3785 MGNKTSPSPSPSTIPLFLSSLLFLLLSTKAQAKDDQPYYCYSSCGSLQDIRYPFRLRGQPLSCGDPDYTLTCENQKPILEFGDGKYYVKSINYENQTIQLVDVNLANGSCNLPSGTVDLFHTDIRYQRYFPHTEISFVNCSKPINDSTFKRVPCMSGNESIIYAVYSGASVYDYQKSCSFPISTSLIDDDYGSKQPSSYEDIHKLLQNGFKLGWSVECRDCALSGLECGYNDSDPKPHYSCYKPYNEYDEVIHAYIILSIIIVSGLFFLVILVCLVIRCIVKRRARKNGEKFYQSLNLKRYTYNDITSVTNNFADKLGKGTFGSVYKGKLADGDLVAVKMLEKCKISEKDFQNEIAKICGTSHPNLIKLVGVCSDVSKRALVYEFMPNGSLDEYLLTKGETKSSSLDQLQEIALGAAKGIHHLHTATDPCILHLDIKPKNILLDQNFIPKVSDFGLRKIYAKDYNFVAMNSAKYIAPELKLNYAAATTESDVYSFGLTLLEMVGKVKNSDSGSSTEAYSISGIYENLSKGEDLEVGNLTEGEGRIARKLSMTGLWCIQVNPSERPSMSKVVEMLEHGTDDFPSAP 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00708 585 PANTHER RUST RESISTANCE KINASE LR10-RELATED 19 217 IPR045874 GO:0004672
Bva11g00708 585 Gene3D Phosphorylase Kinase; domain 1 277 385 - -
Bva11g00708 585 Pfam Wall-associated receptor kinase C-terminal 171 242 IPR032872 -
Bva11g00708 585 PANTHER RUST RESISTANCE KINASE LR10-RELATED 256 582 IPR045874 GO:0004672
Bva11g00708 585 PANTHER OS01G0113300 PROTEIN 256 582 - -
Bva11g00708 585 Gene3D Transferase(Phosphotransferase) domain 1 386 581 - -
Bva11g00708 585 ProSiteProfiles Protein kinase domain profile. 311 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00708 585 Pfam Wall-associated receptor kinase galacturonan-binding 40 102 IPR025287 GO:0030247
Bva11g00708 585 ProSitePatterns Protein kinases ATP-binding region signature. 317 339 IPR017441 GO:0005524
Bva11g00708 585 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Bva11g00708 585 SUPERFAMILY Protein kinase-like (PK-like) 289 575 IPR011009 -
Bva11g00708 585 PANTHER OS01G0113300 PROTEIN 19 217 - -
Bva11g00708 585 SMART serkin_6 311 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00708 585 Pfam Protein tyrosine and serine/threonine kinase 313 574 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00708 Bva-Chr11 10119141 10121086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00708 13 585 Receptor kinase-like Gene Family AT5G38260 34.087 3.54e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bva11g00708 PK_Tyr_Ser-Thr 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00708 - - csin:114283002 498.819