Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00707 atgggGTTGCAGAACCAGCTACACGATTTCTCTTCAGATTCGATTCCGCTACTCCTCATCGCAATCATCGCCGATTGCGTCAACTACCTCCGCTCCTCTCTTCTGGCTTTCCTCCACATCCTCGGATTATCCAGATTCGACCCCAACGCTGTCGTCGACGATGGCTTCATCAGAGCCGTTGGATCGGGTTTCGCCGGCCTGATCGTCCTCGCCGAACAGCTCAACCTCAATCGCCGATTCTCTTACCGACACACCACCCTCGACACCCGCGACGGCGGTGCTGACGCCGCGATTGGATCATCCAAGTGTATCGTTTGCCTGTCCTCGCTCAAGGATGGGGACCTCGTTCGAAAGCTATCGTGTCGCCACGTTTTTCACAAGCACTGTTTCGATGGCTGGCTCGACAGCCTCAAATTTAACTGCCCCCTCTGTCGTTTACCGCTAGTCTCCGACGAGCGCGTAGCCCTCACAGAGCAGCGCGTCGGGGAAGAATTCGTCTCCATGTTCTCCTGCCGATG 518 0.5579 MGLQNQLHDFSSDSIPLLLIAIIADCVNYLRSSLLAFLHILGLSRFDPNAVVDDGFIRAVGSGFAGLIVLAEQLNLNRRFSYRHTTLDTRDGGADAAIGSSKCIVCLSSLKDGDLVRKLSCRHVFHKHCFDGWLDSLKFNCPLCRLPLVSDERVALTEQRVGEEFVSMFSCR 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00707 172 Pfam Ring finger domain 102 145 IPR001841 -
Bva11g00707 172 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 81 154 IPR013083 -
Bva11g00707 172 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 169 - -
Bva11g00707 172 SUPERFAMILY RING/U-box 102 151 - -
Bva11g00707 172 SMART ring_2 103 144 IPR001841 -
Bva11g00707 172 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
Bva11g00707 172 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHA2A 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00707 Bva-Chr11 10115377 10116277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00707 1 170 C3H Transcription Factor Family AT1G15100 51.176 1.10e-48 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00707 K16282 - zju:107413314 232.261