Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00684 ATGGAAGAAAGCAGAACCAAGAGACCCAGGAATTGCAACAGGCACCCAGTTTACCATGGCGTTCGAATAAGAAGTTGGGGCAAATGGGTATCCAGAATTCGTCGACCCCGCAAGAGATCTCGTATCTGGCTTGGTACTTTTGCCACACCAGAAATGGCAACACGTGCTCATGATGCTGTAGTTTTGAGCATTAAGGGATTCGACCAGACCAAAACCTATACCTCAGCTGGAGCATCCTA 239 0.4812 MEESRTKRPRNCNRHPVYHGVRIRSWGKWVSRIRRPRKRSRIWLGTFATPEMATRAHDAVVLSIKGFDQTKTYTSAGAS 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00684 79 PIRSF PTI6 2 78 IPR017392 GO:0003700
Bva11g00684 79 Pfam AP2 domain 16 64 IPR001471 GO:0003700|GO:0006355
Bva11g00684 79 SUPERFAMILY DNA-binding domain 17 69 IPR016177 GO:0003677
Bva11g00684 79 SMART rav1_2 17 75 IPR001471 GO:0003700|GO:0006355
Bva11g00684 79 PRINTS Ethylene responsive element binding protein signature 18 29 IPR001471 GO:0003700|GO:0006355
Bva11g00684 79 PRINTS Ethylene responsive element binding protein signature 40 56 IPR001471 GO:0003700|GO:0006355
Bva11g00684 79 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 3 67 - -
Bva11g00684 79 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 3 67 - -
Bva11g00684 79 Gene3D AP2/ERF domain 17 74 IPR036955 GO:0003700|GO:0006355
Bva11g00684 79 ProSiteProfiles AP2/ERF domain profile. 17 74 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00684 Bva-Chr11 9964570 9964988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00684 3 66 AP2-EREBP Transcription Factor Family AT5G11590 71.875 8.74e-30 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva11g00684 AP2 3.7e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00684 K09286 - jre:109007851 98.5969