Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00651 ATGGCAGAATTCTCACTCTCGGAGACATATGCTTGTTCACCCTCCACCGAACGTGGCCGGGGCATCTTGATTTCCGGCGACCCGAAGTCCAACAACATTCTGTACTGCACTGGCCGATCCGTCATGATCCGCAACCTCGACAACCCGCTCCAGGTTTCCGTCTACGGCGAGCACGCCTACCCCGTCACGGTGGCACGATACTCGCCCAACGGCGAATGGATTGCTTCTGCCGACGTGTCTGGCACCGTTCGGCTATGGGGGACGCACAATGACTACGTCCTCAAGAATGAGTACCGGGTCCTTTCTGGTCGGATCGATGACCTCCAGTGGTCCTTCGACGGGTTGAGGATCGTCGCCTGCGGCGATGGCAAGGGCAAATCCTTCGTTCGCGCTTTTGCGTGGGATACAGGCACCACTGTGGGGGATTTTGATGGCCATTCACGGCGGGTATTGAGTTGCGCATTCAAACCAACAAGGCCATTCCGCATTGTCACTTGTGGAGAAGATTTTGTAGTGAATTTTTATGATGGTCCACCATTCAAGTTCAACATGTGCATCAGGGAGCATTCCAATTTTGTCAATTGTGTTAGATTTTCTCCAGATGGGAGCAAATTTATCACTGTGGGCTCAGATAGGAAGGGTGTTATATATGAAGGGAAGACAGGACAAAAACTTGGAGAGTTGTCTTCCGAGGATGGTCACCAGGGCACCATATATGCTGCTAGTTGGAGTCCTGACAGTAAACAGGTACTTACTGTGTCTGCTGACAAGACTGCAAAAGTATGGGACATTCTTGAGGATGGTAGTGGAAAAGTAAACAAGACACTAGCATTTTCTGAAACTGGTGGGGTGGAGGATATGCTTGTTGGTTGTCTTTGGCAGAATGATCGTCTTGTTGTTATATCCCTCGGTGGCATGATTAATTTGTATTCCGCAAAGGATTTAGATCAAAGCCCGTTATCATTTGCTGGTCACATGAAGAATGTCACTGCTTTGACTGCACTCAACAGAAGCGAGAAGTTGCTTTTGTCCTGCAGCTATGATGGTCTGATTCTTAAATGGATTTCAGGCATTGGATACAGTGGCAAATTAGACAGCAAACCTATCGgacaaattaaattgttaattgcTGGTGAAGAAGAAATTCTTACAACTGGATTTGACAACAAGGTATGGAGAGCTCCTCTGCAAGGGGATGACTTGGGAGCTCCAGAGCATGTTGATGTTGGCAGTCAGCCAAAGGACGTGAGCGTAGCCCGGACTTCACCTGAGCTTGCTCTGGTTGCAATTGAATCTGGGCTTGTCTTGCTTAATGGTTTAAAAATCATCTCAACTATCAAGCTAGAATTCACTGTGACTGCATGTGCTATTGCACCTGATGGTGGTGAAGCAATTGTGGGTGGACAAGATGGTAAGCTGCACATATATTCTGTGTCAGGAGATACTTTCACAGAAGAGGCCGTACTTGAGAAACACCGTGGAGCAATCAATGTAATCCGATATTCTCCAGATGTTTCCTCGTTTGCATCAGCTGATTTAAATCGTGAAGCTGTTGTTTGGGATCGCGTCTCCAGAGAGGTGAAGCTTAATAACATGTTGTTTCACACCGCACGTATTAACTGCTTAGATTGGTCACCTGATAGCACCCTGGTAGCTACTGGCTCACTTGATACATGTGtcattatatatgaaattggaAAGCCAGCATCAAGCCGCATAACCATAAAAGGTGCTCATTTAGGTGGCGTTTATGGCTTGGCTTTCATCGATCAGCATAGAATTGTCAGTTCAGGCGAAGATGGCTGCGTTCGTGTTTGGAGCGTAGCTTCAGAATA 1835 0.4659 MAEFSLSETYACSPSTERGRGILISGDPKSNNILYCTGRSVMIRNLDNPLQVSVYGEHAYPVTVARYSPNGEWIASADVSGTVRLWGTHNDYVLKNEYRVLSGRIDDLQWSFDGLRIVACGDGKGKSFVRAFAWDTGTTVGDFDGHSRRVLSCAFKPTRPFRIVTCGEDFVVNFYDGPPFKFNMCIREHSNFVNCVRFSPDGSKFITVGSDRKGVIYEGKTGQKLGELSSEDGHQGTIYAASWSPDSKQVLTVSADKTAKVWDILEDGSGKVNKTLAFSETGGVEDMLVGCLWQNDRLVVISLGGMINLYSAKDLDQSPLSFAGHMKNVTALTALNRSEKLLLSCSYDGLILKWISGIGYSGKLDSKPIGQIKLLIAGEEEILTTGFDNKVWRAPLQGDDLGAPEHVDVGSQPKDVSVARTSPELALVAIESGLVLLNGLKIISTIKLEFTVTACAIAPDGGEAIVGGQDGKLHIYSVSGDTFTEEAVLEKHRGAINVIRYSPDVSSFASADLNREAVVWDRVSREVKLNNMLFHTARINCLDWSPDSTLVATGSLDTCVIIYEIGKPASSRITIKGAHLGGVYGLAFIDQHRIVSSGEDGCVRVWSVASE 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00651 611 ProSitePatterns Trp-Asp (WD) repeats signature. 250 264 IPR019775 -
Bva11g00651 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 55 96 IPR001680 GO:0005515
Bva11g00651 611 SUPERFAMILY WD40 repeat-like 295 610 IPR036322 GO:0005515
Bva11g00651 611 Gene3D - 9 608 IPR015943 GO:0005515
Bva11g00651 611 Pfam WD domain, G-beta repeat 578 607 IPR001680 GO:0005515
Bva11g00651 611 Pfam WD domain, G-beta repeat 187 212 IPR001680 GO:0005515
Bva11g00651 611 Pfam WD domain, G-beta repeat 223 263 IPR001680 GO:0005515
Bva11g00651 611 Pfam WD domain, G-beta repeat 53 86 IPR001680 GO:0005515
Bva11g00651 611 Pfam WD domain, G-beta repeat 535 563 IPR001680 GO:0005515
Bva11g00651 611 SUPERFAMILY WD40 repeat-like 27 354 IPR036322 GO:0005515
Bva11g00651 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 489 521 IPR001680 GO:0005515
Bva11g00651 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 186 227 IPR001680 GO:0005515
Bva11g00651 611 Gene3D - 13 337 IPR015943 GO:0005515
Bva11g00651 611 PANTHER WD-REPEATCONTAINING PROTEIN WDR1 5 611 - -
Bva11g00651 611 CDD WD40 58 354 - -
Bva11g00651 611 SMART WD40_4 136 176 IPR001680 GO:0005515
Bva11g00651 611 SMART WD40_4 315 355 IPR001680 GO:0005515
Bva11g00651 611 SMART WD40_4 439 477 IPR001680 GO:0005515
Bva11g00651 611 SMART WD40_4 221 263 IPR001680 GO:0005515
Bva11g00651 611 SMART WD40_4 179 218 IPR001680 GO:0005515
Bva11g00651 611 SMART WD40_4 91 135 IPR001680 GO:0005515
Bva11g00651 611 SMART WD40_4 48 87 IPR001680 GO:0005515
Bva11g00651 611 SMART WD40_4 482 521 IPR001680 GO:0005515
Bva11g00651 611 SMART WD40_4 568 607 IPR001680 GO:0005515
Bva11g00651 611 SMART WD40_4 526 564 IPR001680 GO:0005515
Bva11g00651 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 532 565 IPR001680 GO:0005515
Bva11g00651 611 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 576 611 - -
Bva11g00651 611 PANTHER TRANSCRIPTION FACTOR WD40-LIKE FAMILY-RELATED 5 611 - -
Bva11g00651 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 576 611 IPR001680 GO:0005515
Bva11g00651 611 ProSiteProfiles Trp-Asp (WD) repeats profile. 231 264 IPR001680 GO:0005515
Bva11g00651 611 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 231 264 - -
Bva11g00651 611 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 55 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00651 Bva-Chr11 9788713 9792770 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00651 184 510 Eukaryotic Initiation Factors Gene Family AT2G46290 23.077 4.35e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00651 K24736 - gmx:100798693 1031.55