Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00620 ATGAACAATGTTTTCGAATATCGTGTTTCTGAAAGAGCAGCCGCACCTTTGTCTCTCAAAGAGCACCTCAGGATGGAGTCTCTGGTGAAGCATGCAGTGGTTGTTAAGGTTATGGGTCGTACTGGATCCAGAGGGCAAGTGACTCAGGTCAGAGTCAAGTTTCTGGATGATCAGAACCGTTATATCATGAGGAACGTGAAAGGACCAGTTAGAGAAGGTGACATCCTCACCCTGCTCGAGTCCGAAAGAGAAGCAAGGAGGTTGCGTTG 269 0.4796 MNNVFEYRVSERAAAPLSLKEHLRMESLVKHAVVVKVMGRTGSRGQVTQVRVKFLDDQNRYIMRNVKGPVREGDILTLLESEREARRLR 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00620 89 PANTHER 40S RIBOSOMAL PROTEIN S28 25 89 - -
Bva11g00620 89 PANTHER 40S RIBOSOMAL PROTEIN S28 25 89 IPR000289 GO:0003735|GO:0005840|GO:0006412
Bva11g00620 89 Gene3D - 25 89 IPR012340 -
Bva11g00620 89 Hamap 30S ribosomal protein S28e [rps28e]. 25 89 IPR000289 GO:0003735|GO:0005840|GO:0006412
Bva11g00620 89 ProSitePatterns Ribosomal protein S28e signature. 80 88 IPR028626 -
Bva11g00620 89 SUPERFAMILY Nucleic acid-binding proteins 26 89 IPR012340 -
Bva11g00620 89 Pfam Ribosomal protein S28e 29 88 IPR000289 GO:0003735|GO:0005840|GO:0006412
Bva11g00620 89 CDD S1_S28E 30 89 IPR000289 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00620 Bva-Chr11 9569001 9571549 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00620 25 89 Cytoplasmic Ribosomal Protein Gene Family AT5G03850 89.231 1.18e-35 114