Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00544 ATGGGTTCACTTGATGCACCGACAAATACAGAGAACGGTTCCGCCCCAGCCACCGCCACAGGTAGCGGAAAATCTCTCCTTGCCGATGGAAATCCACCGGATGCCACCGGAGTGGCGTCAGAATTCGATGCCTCAAGGAAGCGGAGAGCATCCATGCTTCCCTTGGAGGTCGGAACTCGGGTCATGTGCCGTTGGAGGGACGGAAAGTATCACCCTGTCAAAGTCATCGAACGCCGTAAGGTTTTCGGCGGTGGACCCAACGATTACGAATATTATGTCCATTATACTGAGTTCAATAGAAGGCTTGATGAGTGGGTGAAACTTGAACAACTTGATCTTGATTCAGTTGAGACAGTTGTTGATGAGAAAGTAGAGGATAAGGTGACAAGTTTGAAGATGACACGCCATCAAAAGAGGAAGATTGATGAGACACATGTAGAGGGTCATGAGGAGCTTGACGCTGCTAGCTTACGGGAACATGAGGAATTtacaaaagtgaaaaacaTAGCTACTATAGAACTTGGTAGATATGAGATTGAGACTTGGTATTTCTCCCCCTTCCCACCAGAATACAATGACTGTTTGAAGCTGTACTTTTGTGAGTTTTGCCTCAATTTCATGAAGCGCAAAGAACAACTTCAGAGGCATATGAGGAAGTGTGATCTTAAACATCCCCCCGGTGATGAGATATACAGAAGTGGTACACTGTCAATGTTTGAGGTTGATGGGAAGAAGAACAAGGTTTATGGGCAGAATCTTTGTTATTTGGCAAAGTTGTTTCTTGATCACAAGACCCTCTATTATGATGTGGACTTGTTTCTCTTCTATGTCTTGTGTGAATGTGATGATCGAGGATGTCATATGGTCGGGTATTTCTCCAAGGAAAAACATTCAGAGGAATCTTATAATCTGGCATGTATTCTCACGCTTCCACCCTACCAAAGGAAAGGCTATGGAAAATTTCTGATTGCTTTCTCATATGAGCTTTCCAAGAAGGAGGGTAAGGTTGGTACACCAGAAAGACCCCTTTCAGACCTTGGCATGTTGAGTTACAGAGGATACTGGACAAGGGTTCTCTTAGACATTTTGAAAAAGCACAAGGGTAATATTTCTATTAAGGAGCTTAGTGACATGACAGCCATTAAAGCAGAAGATATATTGACCACCCTTCAAACCCTAGAGCTGATTCAATATAGGAAAGGACAGCATGTTATTTGTGCAGATCCCAAGGTTTTGGATCGCCATCTGAAAGCTGCTGGGCGTGGTGGTCTTGAGGTTGATGTTAGCAAATTGATATGGACTCCTTATAAAGAACAAGGTTG 1322 0.4342 MGSLDAPTNTENGSAPATATGSGKSLLADGNPPDATGVASEFDASRKRRASMLPLEVGTRVMCRWRDGKYHPVKVIERRKVFGGGPNDYEYYVHYTEFNRRLDEWVKLEQLDLDSVETVVDEKVEDKVTSLKMTRHQKRKIDETHVEGHEELDAASLREHEEFTKVKNIATIELGRYEIETWYFSPFPPEYNDCLKLYFCEFCLNFMKRKEQLQRHMRKCDLKHPPGDEIYRSGTLSMFEVDGKKNKVYGQNLCYLAKLFLDHKTLYYDVDLFLFYVLCECDDRGCHMVGYFSKEKHSEESYNLACILTLPPYQRKGYGKFLIAFSYELSKKEGKVGTPERPLSDLGMLSYRGYWTRVLLDILKKHKGNISIKELSDMTAIKAEDILTTLQTLELIQYRKGQHVICADPKVLDRHLKAAGRGGLEVDVSKLIWTPYKEQG 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00544 440 CDD NAT_SF 276 334 - -
Bva11g00544 440 MobiDBLite consensus disorder prediction 1 25 - -
Bva11g00544 440 CDD CBD_MOF_like 58 127 - -
Bva11g00544 440 MobiDBLite consensus disorder prediction 1 43 - -
Bva11g00544 440 SMART chromo_7 69 128 IPR000953 -
Bva11g00544 440 PANTHER HISTONE ACETYLTRANSFERASE 10 439 - -
Bva11g00544 440 Pfam RNA binding activity-knot of a chromodomain 55 113 IPR025995 -
Bva11g00544 440 ProSiteProfiles MYST-type histone acetyltransferase (HAT) domain profile. 164 435 IPR002717 GO:0004402|GO:0006355|GO:0016573
Bva11g00544 440 Gene3D - 165 221 - -
Bva11g00544 440 Gene3D - 44 164 - -
Bva11g00544 440 Gene3D - 343 423 IPR036388 -
Bva11g00544 440 Pfam MOZ/SAS family 225 402 IPR002717 GO:0004402|GO:0006355|GO:0016573
Bva11g00544 440 Gene3D - 223 435 - -
Bva11g00544 440 Pfam MYST family zinc finger domain 166 220 IPR040706 -
Bva11g00544 440 SUPERFAMILY Chromo domain-like 47 165 IPR016197 -
Bva11g00544 440 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 165 436 IPR016181 -
Bva11g00544 440 PANTHER HISTONE ACETYLTRANSFERASE OF THE MYST FAMILY 2 10 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00544 Bva-Chr11 8953769 8958421 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00544 8 440 C2H2 Transcription Factor Family AT5G64610 87.529 0.0 794
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00544 K11308 - cit:102608219 819.69