Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00522 ATGGTGGGGCTTGATATTTtatcaaaggaaaataatacaGATTGGCTGTATACTCTTCTGCATAGCAGCTTTCGCAAATGTAAGGATCATAGAGATCTTAAGAACAGTGAGAAGAATGTCTTCTGTATAGACTGTACACTTCGCTTGTGTAGGCATTGCAAGGAAGCTCATTCCCTCCATAGAACGTTGCAGATATACAGATATGTTTATCAGGATGTAATTCGCCTTTCTGACCTGCAGAAGCATTTTGACTGCTCAAAAATTCAGacatatatatctaataaCGAAAGGATTATACATCTCAATCCTCGGCCTGCATTGCATGATACCAATCCATCAAAAAGATCTAAATACGGTGATCGAAGTCCTGAGTCTCAATTCAAAGTTACAAAACTATTAACAAGATCAAAGTCTGGTGGTGCTTGTGAAGAATGTGGAAGAAATTTACAAGATGAGCGTAATCTCTTCTGTTCTATCGCATGCAAGATCTCAGTTGTTTCGGTGGAGCCCCAAGGCAACCAGAATTCAGAAAGCACTTTAAGAGGGCCTACCAACCAAAGTGCTAAATTGATCAGCACTCAAAAGCCAGAAATTTCAGGCCTTTATTTGAATGATGACAATCAAAATTCAGAAACTGAGTCATCTATCTCTGTGGCTGAACCAGATGACAGGTTTGAACTTGTCAATTTCAGAAAGCGAGCCAGAAAAGGCCTCCCTCAGAGATCCCCTTTTCTATGTATATCTTG 746 0.3861 MVGLDILSKENNTDWLYTLLHSSFRKCKDHRDLKNSEKNVFCIDCTLRLCRHCKEAHSLHRTLQIYRYVYQDVIRLSDLQKHFDCSKIQTYISNNERIIHLNPRPALHDTNPSKRSKYGDRSPESQFKVTKLLTRSKSGGACEECGRNLQDERNLFCSIACKISVVSVEPQGNQNSESTLRGPTNQSAKLISTQKPEISGLYLNDDNQNSETESSISVAEPDDRFELVNFRKRARKGLPQRSPFLCIS 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00522 248 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 244 - -
Bva11g00522 248 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Bva11g00522 248 MobiDBLite consensus disorder prediction 196 216 - -
Bva11g00522 248 Pfam PLATZ transcription factor 67 163 IPR006734 -
Bva11g00522 248 MobiDBLite consensus disorder prediction 110 124 - -
Bva11g00522 248 MobiDBLite consensus disorder prediction 196 217 - -
Bva11g00522 248 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 244 - -
Bva11g00522 248 MobiDBLite consensus disorder prediction 102 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00522 Bva-Chr11 8820356 8822699 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Bva11g00522 PLATZ 2.4e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00522 - - gmx:100809868 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00522 11 8820356 8822699 Bva11g00522 11 8820356 8822699 ECH