Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00501 ATGACTTTCAAGAGGAGGAATGGAGGACGCAACAAGCATGGGCGTGGCCATGTCAAGTTCATTCGCTGCTCCAACTGCGGCAAATGCTGTCCTAAGGACAAGTCAATTAAGAGATTTCTTGTGAGGAACATTGTGGAGCAAGCTGCTGTGAGAGATGTTCAGGAAGCCTGTGTATACGAGCAGTACACTCTTCCCAAGCTGTATGTGAAGATGCAGTACTGTGTGTCCTGTGCAATTCACTCTCATGTTGTTAGGGTGCGATCTCGCACTAATAGGAGGAACCGGGAGCCACCACAGCGCTTTATGAGGCGCAGGGATGATCTGCCAAGGCCTGGTCAACCTGGTCAAGCACCTCGCCCTGCCGGAACAGGACCTCCAGCCCGCGCTTA 389 0.5244 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKSIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTNRRNREPPQRFMRRRDDLPRPGQPGQAPRPAGTGPPARA 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00501 129 Gene3D Ribosomal protein S26e 1 114 IPR038551 -
Bva11g00501 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 127 - -
Bva11g00501 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Bva11g00501 129 Pfam Ribosomal protein S26e 1 105 IPR000892 GO:0003735|GO:0005840|GO:0006412
Bva11g00501 129 MobiDBLite consensus disorder prediction 86 129 - -
Bva11g00501 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 127 IPR000892 GO:0003735|GO:0005840|GO:0006412
Bva11g00501 129 MobiDBLite consensus disorder prediction 90 110 - -
Bva11g00501 129 MobiDBLite consensus disorder prediction 113 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00501 Bva-Chr11 8611481 8613650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00501 1 116 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 84.483 1.17e-69 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00501 K02976 - fve:101302876 208.379