Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00453 ATGGTTTTCCCTAAACCAGCTTCTGAATCTGATCTCGTTTTCCACTCAAATTTTGCTTCTCCTTATGGTGGAGATTCTCTTCCAAGGTTTGATATGCCTGAAAACTCGATGTCGAAGGAGTCAGCATACCAGAACATTCACGATGAATTGCAGCTTGATGGGATTCCAAAGCTGAACTTGGCTTCCTTTGTGACCACAGCCATGGAGGAAGAGTGCAACAAGCTCATTATGGAATCCATCAACAAGAACTATGTTGACATGGATGAGTATCCTGTTACCACTGAGCTTCACAACCGGTGTGTGAACATGATAGGGCGTTTGTTCAACGCTCCAATTGGAGAAAATGATGATGCAATTGGAGTGGGAACTGTTGGCTCATCGGAGGCTATAATGCTAGCAGGTCTTGCATTTAAGAAGAGGTGGCAGAACAAAAGGAAAGCTCAAGGCAAACCCTTTGACAAGCCTAACATTGTCACTGGTGCCAATGTACagGTTTGTTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTGAAGGAAGTGAAGGTGAGGGAAGGATACTATGTGATGGACCCTGCCAAAGCTGTTGACATGGTGGATGAGAACACTATTTGTGTGGCTGCAATTCTTGGCTCAACTTACAATGGAGAATTTGAAGATGTCAAGCTCTTAAATGACCTTCTGCTAGAAAAGAACAAGCAAACTGGATGGGATACAGCTATTCATGTTGATGCAGCCAGTGGTGGCTTCATTGCCCCCTTCCTTTACCCAGAGCTTGAATGGGATTTCAGGCTTCCATTGGTGAAGAGCATCAATGTTAGTGGCCACAAGTATGGTTTAGTTTATGCTGGAATTGGTTGGGTTCTATGGAGGACCAAAGAGGACTTGCCTGAGGAACTTGTTTTCCATATTAATTACCTTGGTGCTGACCAACCCACCTTCACTCTCAATTTTTCCAAAGGTTCTAGCCAGATCATTGCTCAATATTATCAGTTAATTCGCCTTGGCAAAGAGGGCTACCAAAGTGTGATGGAGAAATGTAGGGACAATGCTATGGTGTTAAAGGAAGGGCTGGAGAAAATTGGATGCTTTAACATACTTTCAAAGGACAATGGTGTTCCCGTGGTGGCCTTTTCTCTCAAAGACACAAATCTATGCAATGAATATGAGTTATCGGAGAAGCTGCGCCGCTACGGCTGGATTGTCCCGGCATATCCAATGCCGCCGGCAGCTCAGCATATCAATGTGCTCCGAGTTGTGATTAGGGCAGAGTTTTCACGCACACTTGCTGAACACCTCGTCCATGACATAATAAATGTGTTGAATGAGCTTGAAAAACATCCTCCTAAGCACACTACCAAAGTGAATAATGACATTAAGGAAGAGAGGGCAGTGGATGACAGTGCTGGGATCAAGAGGACTGCTTTAGATGCCCAGAGGGAAATAATTTCCCAAGAAGCCAACAAGAGGCAGAAAATCTTGGCAGCCTA 1490 0.4436 MVFPKPASESDLVFHSNFASPYGGDSLPRFDMPENSMSKESAYQNIHDELQLDGIPKLNLASFVTTAMEEECNKLIMESINKNYVDMDEYPVTTELHNRCVNMIGRLFNAPIGENDDAIGVGTVGSSEAIMLAGLAFKKRWQNKRKAQGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKVREGYYVMDPAKAVDMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTAIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVLWRTKEDLPEELVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGKEGYQSVMEKCRDNAMVLKEGLEKIGCFNILSKDNGVPVVAFSLKDTNLCNEYELSEKLRRYGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAEHLVHDIINVLNELEKHPPKHTTKVNNDIKEERAVDDSAGIKRTALDAQREIISQEANKRQKILAA 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00453 496 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bva11g00453 496 Gene3D - 66 360 IPR015421 GO:0003824
Bva11g00453 496 Gene3D - 361 448 - -
Bva11g00453 496 SUPERFAMILY PLP-dependent transferases 18 448 IPR015424 -
Bva11g00453 496 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 17 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bva11g00453 496 CDD DOPA_deC_like 59 437 - -
Bva11g00453 496 Gene3D - 1 65 - -
Bva11g00453 496 PANTHER GLUTAMATE DECARBOXYLASE 1 495 - -
Bva11g00453 496 PANTHER GLUTAMATE DECARBOXYLASE 1 495 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00453 Bva-Chr11 8228530 8236542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00453 1 484 Calmodulin-binding Proteins AT5G17330 75.720 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00453 K01580 - gmx:100782330 838.18