Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00448 ATGTCATTGGCTGCTGCAGGCTCCCTTTTCAAGGTGGTGGAGATAcaagggagagggagagggttGGTGGCATCTTGTCCCATTAGGGCCGGCCAAGTTGTCCTTAAAGACTCTCCTGTCCTGTTATATTCTGCTTTGCCTTTGATCCCTCAGTCTTCTCCGTCGTCCTCCTCTACCCCAGCCTCATGCTTCTGTGACCACTGCTTTAGAATTCTGCTGCCATCATCTTCCACAGTTTCATGCCCTTCATGTCAACATTGTCGCTTTTGTAGCCCGAAGTGCCTCTCGATTGCCCTCAACTCGTCCCACTCTTCTTGGGTATGTCAAGCATTATCTCATCTCCGAGTCAATCCAGTGCTGCTTCAACAGCCCTTAGAGCGCCAACTCCAGGCCCGTTTTCTCATTTCTGCCTACAATCTTGCACAAGTCTCCCCTTCAGATTTCCAAATTTTGCTTTCTGTTCAGGGTTCTCCTGATGCTGCCACTGCTGAAGCAGCTCAGTTCCTACACCCCCTTATTTCATCCCTCTGCCCACCTCCAATTAACCCTCAGAATGGATTTTCTATTGAACTCATTGCGGCCTTGCTGGCCAAGGACAAGCTTAATGCCTTTGGTTTGATGCAGCCATTCTCTGAAGATGATGAGCAAAGATCTGTTAGGGCTTATGGCATCTACCCCCATGCCTCCTTATTCAACCATGATTGCCTTCCCAATGCTTGCAGATTTGATTATGTGGACACCAGTGCACCCGATGATAATCATAACACTGACATTATCATTAGGATGATTCATGATGTTCCCGAAGGAAGGGAGATCTGTTTGAGTTATTTCCCTGTGAATGAAAACTATTCCAGTAGGCAAAAGAGATTATCGGAAGACTATGGCTTCACCTGTAGCTGTGATCGATGCAATGTCGAAGCAAATTGGTCAGATAATGACAATGTTGAGGATGATGCAGAGGATGAAGACGAGGCTATGGATGAGGATCAAGATGAAAGTTTGGCAGCTTCAGACACCGAAAACATTCCTCCAGAAGAGAATAGTGATTTCCCAcatgcatatttctttttgagatACATGTGTGATAGAAAGAATTGCTGGGGCACATTAGCTCCTTTACCTCCAAATGCTGATACTCCATCTACTGTCATGGAATGTAATGTATGTAGTAACCTGAAGAACGACGATGGGTTTGGTGTCATTGAAGGACAAGATGGAGTTTCCATGGAGGATTG 1235 0.4453 MSLAAAGSLFKVVEIQGRGRGLVASCPIRAGQVVLKDSPVLLYSALPLIPQSSPSSSSTPASCFCDHCFRILLPSSSTVSCPSCQHCRFCSPKCLSIALNSSHSSWVCQALSHLRVNPVLLQQPLERQLQARFLISAYNLAQVSPSDFQILLSVQGSPDAATAEAAQFLHPLISSLCPPPINPQNGFSIELIAALLAKDKLNAFGLMQPFSEDDEQRSVRAYGIYPHASLFNHDCLPNACRFDYVDTSAPDDNHNTDIIIRMIHDVPEGREICLSYFPVNENYSSRQKRLSEDYGFTCSCDRCNVEANWSDNDNVEDDAEDEDEAMDEDQDESLAASDTENIPPEENSDFPHAYFFLRYMCDRKNCWGTLAPLPPNADTPSTVMECNVCSNLKNDDGFGVIEGQDGVSMED 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00448 411 CDD SET_SMYD 201 303 - -
Bva11g00448 411 Gene3D - 122 203 - -
Bva11g00448 411 SUPERFAMILY SET domain 11 299 IPR046341 -
Bva11g00448 411 ProSiteProfiles SET domain profile. 8 277 IPR001214 GO:0005515
Bva11g00448 411 Pfam SET domain 19 276 IPR001214 GO:0005515
Bva11g00448 411 Gene3D SET domain 21 303 IPR046341 -
Bva11g00448 411 MobiDBLite consensus disorder prediction 311 347 - -
Bva11g00448 411 Gene3D - 64 117 - -
Bva11g00448 411 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 3 399 IPR044238 -
Bva11g00448 411 SMART set_7 8 283 IPR001214 GO:0005515
Bva11g00448 411 MobiDBLite consensus disorder prediction 311 335 - -
Bva11g00448 411 Coils Coil 312 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00448 Bva-Chr11 8187736 8190510 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva11g00448 SET 1.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00448 - - gmx:100783406 609.757