Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00440 ATGGAATCCAACGGGAAAACATTGCCGGAAAGCGAAATCCCAGACTGGGAACAAGAAATATCTTCCCACATGAAGTTGAAGAATAGGGTTCTTGGAAACCCAACTGAAAAATTCGAGTACTTTAATTCCTTATCCCAGGAATTCGTTGTTCCTGATCCAAACGGTGAACCAGCTTTCGTAGAATTTCTGGGTGAAGTCTCCGGTTTCGTGAAACGCCGGTTACTCTCCGGCGAAGATGATTTTATCAAAGATCCTAATTATGagcttttctttgaaaattcaaagctCGATGAAGAAACCCTTGTCCTTGAAATCCTCCAAGACAGTGTATTGGTAAGGTACGATGATGTAGAGGATATTCATAACGAATCAAATTCTGGGAAGAACAGAGATTTAGGAGAAAAGCATGTTCCTTTGGAAACAAACATGAATTTAGATGCTGCAGAGAAACATCTTGGAAGAAAGCATGTTTCTTTGCAGACCAATGTGGGTTCAGATGCTGAGAAGCTTGTCTCAGAGAGTGGCGTGCAGGGTAGAAGAAGATGTAGGCCAAAGAAGGTTCTAGAAGCTAGGGTTGCTGGTAATGCAACCAAGAAAGTTAAGGTTGATTTGGGGAATCAGAATCTGAGTTCTGGTGCTGACATAAAAGAAGAGATACACAGAGGATTTCAACCTGAAAGGAAACGTCCAGAGGCAAGACCAGTTttAAACGTGAACAAGAGGTGTTTAAGTCATATTAtcaacaaaaaggaaagaagagagtTTAGAGAAAAACTCATCGCCATTCTTCAGAAGCCTTACTGTGATGAAGAATATGAAACACTTTACCAGAGGATTAGTCTTAGAACGCCAATGCAACGCACTAGAGAGTTGCGTAATGGCAAATCAATAGCCTATGAAGATGATGTTGCAGGAAAGTCTTATCTTGATTACTATACTGTTGTCCCCATTCCTGAAAATGAGCAAAAGGAGGGTGTTCCTAGCTCAATCATAAGAGAAATCTCTAGTCTCAAGGAATTGGAACACGCCAATATTGTTAGGTTGCTGGATGTGCTGAACATGAATCATCATCatgtatttcttatttttgagcACATGGACCTTAATCTAAACAAATTCATTATAGACAAAACGATTCCCAAGGATGCACTGCTTGTGAAAAAATTCCTGCATCAAATGCTTTCTGCTATTGCATATCTCCATTCTCTTAACATTCTTCACAGAGATTTGAAACCTCAGAATGTCCTGGTTGATCTCACTAATAAGATAGTGAAAGTAGCTGACTTTGGTTCAGCCAAAGATAGCAGTGCTCTTCTGAAAAATACTAAAGATGTGGGGACTCTCTGGTACAAGGCACCAGAAATTTTGTTTGGCTCCGCTGAATACTCAACATCAGGTGATATATGGTCTATGGGTTGCGTATTTGCTTCGATGGTGAAGGGTCAGCCTCTGTTCAGTCCTAAATACGATTTGGACATTTTCAAAGAGATATTTAGCCTTCTTGGCACTCCTACTGAAGAAACCTGGCCTGGATTAACCTCTGTATGCGACTTTATGGATTACTTCAACCCTCCAACCGAGCCAAAAGACCTGAGATTTGTGTTTCCTACTCTTGAACCAGCTGGCGTTGATCTTCTTTCAAAAATGCTCTGCCTCCATCAAAATAGTAGAATTTCAGCTGAAGATGCTCTTAAGCATGAATTCTTCAATGGTATTGAGATGGAAGGAAAATCAGAAGAAATTCCTGATATTCTTGAGAAAAAAGTTGCTGAAAACCTGATATCTGATCCTCGTCATAAAGATGAAAGTGACTTGAATTCTAGAAGAGAGCACATTTTTGCACCATTAAATGATCCTGATACTGTGACTGAAGACAACCAAATGCGTGATCCAGCAGAACCATGTATTTCTCATCATTCAGACAAAGATGATGTTCAACCAGGGACGGAAGAGCACCTTGTGAAACCACTTGGTAGTTTTGAAATTCAGGATACAAGTGACTTGAATTCTAGAGAGCACGGTTTTGCACCATCAAATGATCCTGATACTGTGACTGAAGAAAACCAGATGCGTGATCCAACAGAACCATCTTGTGTTTCTCATCATTCAGACACAGATTATGTTCAACCAGGGACAGAAGAGCACCTTGTGAAACCACTTGGTAGTTTTGAAATTCAGGATACAAGTGACTCGAATTCTAGAAGAGAGCACCTTGTTGTGCCACCAGATGATCCTGTTTGTGTGAGTGAACACCCTTTAGAGCCATCTAATGAAGGTTGGCACTTTGTGCAGCCACTTGATATGCCACCAGAAAACAACCTGAGGTCTGGCCCTACAGAAGAGCCTTTAAAGCCATCCCATGGTAGTCATGATGTAGACAAAGACGAAGTTCAATCAGGATA 2402 0.398 MESNGKTLPESEIPDWEQEISSHMKLKNRVLGNPTEKFEYFNSLSQEFVVPDPNGEPAFVEFLGEVSGFVKRRLLSGEDDFIKDPNYELFFENSKLDEETLVLEILQDSVLVRYDDVEDIHNESNSGKNRDLGEKHVPLETNMNLDAAEKHLGRKHVSLQTNVGSDAEKLVSESGVQGRRRCRPKKVLEARVAGNATKKVKVDLGNQNLSSGADIKEEIHRGFQPERKRPEARPVLNVNKRCLSHIINKKERREFREKLIAILQKPYCDEEYETLYQRISLRTPMQRTRELRNGKSIAYEDDVAGKSYLDYYTVVPIPENEQKEGVPSSIIREISSLKELEHANIVRLLDVLNMNHHHVFLIFEHMDLNLNKFIIDKTIPKDALLVKKFLHQMLSAIAYLHSLNILHRDLKPQNVLVDLTNKIVKVADFGSAKDSSALLKNTKDVGTLWYKAPEILFGSAEYSTSGDIWSMGCVFASMVKGQPLFSPKYDLDIFKEIFSLLGTPTEETWPGLTSVCDFMDYFNPPTEPKDLRFVFPTLEPAGVDLLSKMLCLHQNSRISAEDALKHEFFNGIEMEGKSEEIPDILEKKVAENLISDPRHKDESDLNSRREHIFAPLNDPDTVTEDNQMRDPAEPCISHHSDKDDVQPGTEEHLVKPLGSFEIQDTSDLNSREHGFAPSNDPDTVTEENQMRDPTEPSCVSHHSDTDYVQPGTEEHLVKPLGSFEIQDTSDSNSRREHLVVPPDDPVCVSEHPLEPSNEGWHFVQPLDMPPENNLRSGPTEEPLKPSHGSHDVDKDEVQSG 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00440 800 ProSiteProfiles Protein kinase domain profile. 285 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00440 800 MobiDBLite consensus disorder prediction 595 650 - -
Bva11g00440 800 Gene3D Transferase(Phosphotransferase) domain 1 370 602 - -
Bva11g00440 800 MobiDBLite consensus disorder prediction 595 615 - -
Bva11g00440 800 SUPERFAMILY Protein kinase-like (PK-like) 321 572 IPR011009 -
Bva11g00440 800 MobiDBLite consensus disorder prediction 690 706 - -
Bva11g00440 800 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Bva11g00440 800 Gene3D Phosphorylase Kinase; domain 1 315 367 - -
Bva11g00440 800 MobiDBLite consensus disorder prediction 784 800 - -
Bva11g00440 800 SMART serkin_6 285 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00440 800 Pfam Protein kinase domain 319 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00440 800 MobiDBLite consensus disorder prediction 623 650 - -
Bva11g00440 800 PANTHER CELL DIVISION PROTEIN KINASE 321 574 - -
Bva11g00440 800 MobiDBLite consensus disorder prediction 724 800 - -
Bva11g00440 800 PANTHER CYCLIN-DEPENDENT KINASE A-2 321 574 - -
Bva11g00440 800 MobiDBLite consensus disorder prediction 668 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00440 Bva-Chr11 8147478 8154791 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00440 321 572 Core Cell Cycle Gene Families AT3G48750 48.235 1.92e-72 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Bva11g00440 Pkinase 7.1e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00440 K02206 - csin:114261535 260.381