Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00434 ATGGAAATTTTTGAGGACCCGAAGTATTTTGGTGTGAGCTTcggaagagagagagggtaTGGAGAAATTTTCAAGTGCCTTGATCAAACGACAGGCAACTATGTGGCCGTCAAGAAGATTGTTGATTATACCTGGGATATTGACGTTCCAAGCACAAAAATAAGAGCAGTATCTTTTCTGAAGGAGTTGAATCATGACAACATTATCAGATTGCTGGACATTTTGAACTTGAAGGATGGTGTATACATTGTGCTAGAATATTTTGATCTTgatctatataaatttatatacagTCGAAGCATTCCTAAGGATCAACTGCAAATTGAAAATATCCAGCAGCAGATACTTTCTGCAGTAGCATACTgccattcaaataaaattgttcaTGGAGATTTGAGACCTGAGAATTTCCTGATTGATCTTGATCGTTCTAGCTATATAGTGAAGCTAGCAAACTTTGAATCTGCCAGATCATTAGAAGGTCTTCCAGTTGGTTATGGCTGCCAAAAAATGCTGTACCTAGAACTAAATCAAAGAATTTCTGCTGAAGGTACTCTGGAGCATTATTACTTTGGCAGTGTTAAGAAGGAAGGAAAATCAGAAGAAATTCCTGagattcttgaaaaaaaagCTACTGAAAACCTGATATATGATCCTTGTCATAAAGATGAAAGTGACTTGAATTCTAGAAGAGAGCACATTTTTGCACAATCAAATGATCCTCATACTATGACTGAAGACAACCAGATGCGTGATCCAACAGAACCATCTTGTGTTTCTCATTATGCAGACGAAGATGATGTTCAACCAGGGACGGAAGAGCACCTTGTGAAACCACATGGTAGTTTTGAAATTCAGGATACAAGTGACTTGAATTCTAGAAGAGAGCACGCTTTTGCACCATCAAATGATCCTGATACTGTGACTGAAGACAACCAAATGCGTGATCCAACAGAACCATCTTGTATTTCTCATCATTCAGACAGAGATGATGTTCAACCAGGGACGGAAGAGCACCTTGTGAAACCACTTGGTAGTTTTGAAATTCAGGATACAAATGACTTGAATTCTAGAGAGCACGTTTTTGCACCATCAAATGATCCTGATACTGTGACTGAAGACATCCAGATGCGTGATCCAACAGAACCATCTTGTGTTTCTCATCATTCAGACACAGATGATGTTCAACCAGGGACAGAAGAGCACCTTGTGAAACCACTTGGTAGTTTTGAAATTCAGGATACAAGTGACTCGAATTCTAGAAGAGAGCACCTTGTTGTGCTACCAGATGATCCTGATTGTGTGAGTGAACACCCTTTAGAGCCATCTAATGAAGGTTGGCACTTTGTGCAGCCACTTGATGTGCCACCAGAAGACAACCTGAGGTCTGGCCCTACAGAAGAGCCTTTAAAGCCATCCCATGGTAGTCATGATATAGACAAAGACGAAGTTCAATCAGGATA 1463 0.3814 MEIFEDPKYFGVSFGRERGYGEIFKCLDQTTGNYVAVKKIVDYTWDIDVPSTKIRAVSFLKELNHDNIIRLLDILNLKDGVYIVLEYFDLDLYKFIYSRSIPKDQLQIENIQQQILSAVAYCHSNKIVHGDLRPENFLIDLDRSSYIVKLANFESARSLEGLPVGYGCQKMLYLELNQRISAEGTLEHYYFGSVKKEGKSEEIPEILEKKATENLIYDPCHKDESDLNSRREHIFAQSNDPHTMTEDNQMRDPTEPSCVSHYADEDDVQPGTEEHLVKPHGSFEIQDTSDLNSRREHAFAPSNDPDTVTEDNQMRDPTEPSCISHHSDRDDVQPGTEEHLVKPLGSFEIQDTNDLNSREHVFAPSNDPDTVTEDIQMRDPTEPSCVSHHSDTDDVQPGTEEHLVKPLGSFEIQDTSDSNSRREHLVVLPDDPDCVSEHPLEPSNEGWHFVQPLDVPPEDNLRSGPTEEPLKPSHGSHDIDKDEVQSG 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00434 487 Gene3D Phosphorylase Kinase; domain 1 22 89 - -
Bva11g00434 487 MobiDBLite consensus disorder prediction 321 337 - -
Bva11g00434 487 MobiDBLite consensus disorder prediction 416 438 - -
Bva11g00434 487 Gene3D Transferase(Phosphotransferase) domain 1 90 213 - -
Bva11g00434 487 MobiDBLite consensus disorder prediction 236 487 - -
Bva11g00434 487 MobiDBLite consensus disorder prediction 471 487 - -
Bva11g00434 487 MobiDBLite consensus disorder prediction 258 281 - -
Bva11g00434 487 ProSitePatterns Tyrosine protein kinases specific active-site signature. 127 139 IPR008266 GO:0004672|GO:0006468
Bva11g00434 487 MobiDBLite consensus disorder prediction 238 255 - -
Bva11g00434 487 SUPERFAMILY Protein kinase-like (PK-like) 17 197 IPR011009 -
Bva11g00434 487 Pfam Protein kinase domain 20 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00434 487 PANTHER CYCLIN-DEPENDENT KINASE 16 160 - -
Bva11g00434 487 MobiDBLite consensus disorder prediction 384 400 - -
Bva11g00434 487 PANTHER CELL DIVISION PROTEIN KINASE 16 160 - -
Bva11g00434 487 ProSiteProfiles Protein kinase domain profile. 9 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00434 Bva-Chr11 8109974 8116529 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00434 17 164 Core Cell Cycle Gene Families AT3G48750 43.624 3.90e-29 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Bva11g00434 Pkinase 1.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00434 K02206 - crg:117680997 112.849