Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00428 ATGAGCAAATATAGGAAAAATTTACCAAACCCAGTATTTCTTGTGCTTCCAAACGGTGAGAAATGGGAAGTGAATTGGGTAAAACATGATGGTGATGTTTACTTTCAAAAGGGTTGGAAAGAATTTGCTGAACACTATTCTCTTGCTCATGggcattttcttgtttttaaatatgaaggaAAATCTAGATTTTATGTGCACATATTTGATACAAGTGCCTTGGAAATAAGCTATCCTATGGTTAAGAGCGGTGAAATTTCTCATGAATGTCcaccaagaaagaggaaaagatcAAGATCTCCAATCAAAAAATCTCATCAATCTGATAAGATGAGAAGCAGCTTAAGTAGAGAAGCTAAAAGCAACTTGAAGCAACAATCTGGAATGTCAAAACTTCATTTGGAATTGGATTTTCCTGAGACAAAAGGTGGGTTTCTTCCCTA 443 0.316 MSKYRKNLPNPVFLVLPNGEKWEVNWVKHDGDVYFQKGWKEFAEHYSLAHGHFLVFKYEGKSRFYVHIFDTSALEISYPMVKSGEISHECPPRKRKRSRSPIKKSHQSDKMRSSLSREAKSNLKQQSGMSKLHLELDFPETKGGFLP 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00428 147 CDD B3_DNA 6 70 IPR003340 GO:0003677
Bva11g00428 147 MobiDBLite consensus disorder prediction 85 130 - -
Bva11g00428 147 SUPERFAMILY DNA-binding pseudobarrel domain 2 72 IPR015300 -
Bva11g00428 147 Pfam B3 DNA binding domain 8 71 IPR003340 GO:0003677
Bva11g00428 147 PANTHER B3 DOMAIN-CONTAINING 2 121 - -
Bva11g00428 147 Gene3D - 1 73 IPR015300 -
Bva11g00428 147 ProSiteProfiles B3 DNA-binding domain profile. 1 72 IPR003340 GO:0003677
Bva11g00428 147 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 121 - -
Bva11g00428 147 SMART B3_2 1 72 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00428 Bva-Chr11 8070536 8070979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00428 1 78 B3 DNA Binding Superfamily AT3G18990 43.590 6.43e-18 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Bva11g00428 B3 9.2e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00428 - - cam:101507713 118.627