Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00425 ATGGATTCAGCTGATCCATCAGAGGTGCTAGAAGGTTGGAATTACAATGTTATTGGAAGGATTGGAGGTGAAGGTCGTCCTGTTTACAAGTGCCTGAATCGTGACACTAATCTGGTTGTATCTGTTAAAGTTTTTTCCATTCTTGAAGAGCAAAACGAGGGCATTCCAGGCTCAATCATAAGGgaaatctctcttctcaaAGAATTGAAACATCCCAATATTGTTAGGTTGCTGAAGGTGCTGAACAAGGGTTATgatatatttcttgttttcgaGCGTCCGGAGATTGATCTAGATGAATTCATTAAAAACCAAACGATTCCTAAGGACGCACTTCTAGTGAAAAAATTCCTACATCAAATGCTTTCTGCTATCGCATATCTCCATTCTCACAACGTTCTTCATAGAGATTTGAAGCCTCAGAATGTGCTGGTTAATCTCACTGACGAGACAGTGAAACTATCTAACATCGGTTCAGCCCAAGATCATGAAGTTGGGACTCTCTGTTATAGTTACAATGCACcagaaattttgtttggtgCTGCTGAATACTCAAAAGCATCTGATATGTGGTCTGTGGGATGTATATTTGCTGAGATGATCATCGGCCGGTCTTTGTTCCCTGCTACAAAGGAATTACAAGCTTTCgatcaaataattaaCCTTCTTGGCTCTCCTAGTGAAGAATCCTGGCCAGGAATAACCTCTTTATTCGACTTCATGAATTTGTCCCATCCTTCAACCAGGCCAAAGGATCTGGCACTTGAGTTTCCTACTCTTGCACCAGCTTGTGTTGATCTTCTTTCGAAAATGCTCTGCCTCTATCCAAATGGTAGAATTCCAGCTAAAGAAGCCCTTAAGCATGAATTCTTCAATGATATAGAGAAGgtACAGTG 896 0.3839 MDSADPSEVLEGWNYNVIGRIGGEGRPVYKCLNRDTNLVVSVKVFSILEEQNEGIPGSIIREISLLKELKHPNIVRLLKVLNKGYDIFLVFERPEIDLDEFIKNQTIPKDALLVKKFLHQMLSAIAYLHSHNVLHRDLKPQNVLVNLTDETVKLSNIGSAQDHEVGTLCYSYNAPEILFGAAEYSKASDMWSVGCIFAEMIIGRSLFPATKELQAFDQIINLLGSPSEESWPGITSLFDFMNLSHPSTRPKDLALEFPTLAPACVDLLSKMLCLYPNGRIPAKEALKHEFFNDIEKVQ 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00425 298 Pfam Protein kinase domain 23 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00425 298 PANTHER CYCLIN-DEPENDENT KINASE A-2 28 296 - -
Bva11g00425 298 ProSiteProfiles Protein kinase domain profile. 15 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00425 298 PANTHER CELL DIVISION PROTEIN KINASE 28 296 - -
Bva11g00425 298 Gene3D Transferase(Phosphotransferase) domain 1 96 298 - -
Bva11g00425 298 SUPERFAMILY Protein kinase-like (PK-like) 15 294 IPR011009 -
Bva11g00425 298 Gene3D Phosphorylase Kinase; domain 1 27 93 - -
Bva11g00425 298 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Bva11g00425 298 SMART serkin_6 16 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00425 Bva-Chr11 8058341 8061905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00425 14 294 Core Cell Cycle Gene Families AT3G48750 43.836 5.34e-77 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Bva11g00425 Pkinase 3.5e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00425 K02206 - nnu:104591163 249.595