Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00397 ATGGGTAGTTGTGGAAGAGAAGGAGCAGTGAGGCAGTACGTAAGATCGAAGGTGCCTCGTCTGAGATGGACACCTGAACTGCATCGCTGCTTTGTTCATGCCATTGAGAGCCTTGGAGGTCATCACAAGGCTACCCCTAAGCTTGTTCTTCAGTTAATGGATGTCAAAGGACTCACTATCTCACACGTTAAGAGCCATCTTCAGATGTACAGAAGCATGAGAGGTGACTTGGGCAGACAAGATAGGAGTTCCAACCAACATAGAAGACAATCTTTTGAGGAACATGATGATGGGTGTGTTGATGAAGTGAATGATGTTGGTGTTGGTATTGGTATTGGTATTCACCCTTCAAAATCCAATGGAAGAGAATCAGATTCCCACTTCAGCTACAGTGATTTCTCCTCAAAAAGAGCTAGAATCGAGACGACGAGTTCAATCTCAGAGAGCCTGCAATGCAGCCAAAGAATATGTGAAACTGTCCCAAATCCGTACTCCTTTTATGATTATATGCAGGCCATGGCTGAGCAGCACAAGGGAATAAAGGAGCTTTATGGTGGTTCAAGGTGGCAGAACCAACCCCATTCCACAGCCTTCAATTTTCTGCCAGATTTTGGCAAACTCAGCTCATTCAAATGTCCAAAGCAAGAATCTGATTTCCCTCAGGTGAATGAAGTTGAGAACATAAAGACAGCAGCACATGCAGAAGACGAAGACGATAAAGGGTGTGAGTTGTCGTTGTCACTCTCATTGCCCAATCCTTCTTCTCAAAGAAGCAATGCTTCTTCGGCAAGCGAGATTAGTGAAGCAGCAATCTCATCATTCCCTGGCTTTCATAACTACAAGGATTGCTCTAGTTCTTCCTCTGCCAAAGACAGAATTAACCTAGACCTATCTATAGCCCTTTGTGGCAACTG 914 0.4453 MGSCGREGAVRQYVRSKVPRLRWTPELHRCFVHAIESLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQDRSSNQHRRQSFEEHDDGCVDEVNDVGVGIGIGIHPSKSNGRESDSHFSYSDFSSKRARIETTSSISESLQCSQRICETVPNPYSFYDYMQAMAEQHKGIKELYGGSRWQNQPHSTAFNFLPDFGKLSSFKCPKQESDFPQVNEVENIKTAAHAEDEDDKGCELSLSLSLPNPSSQRSNASSASEISEAAISSFPGFHNYKDCSSSSSAKDRINLDLSIALCGN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00397 304 MobiDBLite consensus disorder prediction 111 130 - -
Bva11g00397 304 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Bva11g00397 304 Gene3D - 18 74 - -
Bva11g00397 304 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Bva11g00397 304 MobiDBLite consensus disorder prediction 75 100 - -
Bva11g00397 304 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Bva11g00397 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Bva11g00397 304 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 1 304 IPR044848 GO:0003700
Bva11g00397 304 MobiDBLite consensus disorder prediction 75 97 - -
Bva11g00397 304 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00397 Bva-Chr11 7719030 7723124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00397 1 77 G2-like Transcription Factor Family AT1G14600 73.171 4.17e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva11g00397 Myb_DNA-binding 3.7e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00397 - - jre:108997116 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00397 11 7719030 7723124 Bva11g00397 11 7719030 7723124 ECH