Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00375 ATGTCCAAAGGAACAGGATTGCTCCAAATAATTGGAGtagaagctagttggaactaCTATTATGGTGTGCTTTATAGTCGCACTGACTTAGGACTTGTCATGGGAGAAGTGACTGGACATTATATTCCACCGTACTTTGCAGCCAGATTTCTTCTTGGAatcacatttttgttttggttgttGACGTATACTTGGAGAAGAAGACATATTTCTGTTTATAGAGATATTGAAGAATTTTTGGAAGATAACAACCTTATGCCAATTAGGTACTCATACAACGAGATAAAGAAGATGACTAGAGGTTTTAGAGACAAATTGGGTGAAGGAGGCTTTGGCTCTGTATATAAAGGAAAGCTACGGAGTGGACCTTTTGTAGCAGTTAAGATGTTGGGTAAAGCCAAGGCTAATGGCCAAGAATTCATTAGTGAAGTTGCAACAATTGGAAGGATACACCATACTAATGTAGTGCAGCTTattggattttgttttgagGGATCAAAACATGCTCTTATATATGAATTCATGCCTAATGGGTCTCTTGATAAATATGTTTTCTCCAAAGAGATTAgtgtttttttaagttatgaGGAAATGTATGCAATATCTATTGGAGTGGCTCATGGAATTGCTTATCTTCATCAAGGTTGTAACAtgcaaattttgcattttgatatCAAGCCCCATAACATTCTTTTAGATAAAAACTTCATTCCAAAAGTTTCAGACTTTGGACTTGCAAAGTTGTATCCTATTGATGATAGCATTGTCACTTTGACTGCAGCAAGAGGAACAATTGGCTACATGGCTCCTGAATTGTTTTATGACAATATTGGGGGAGTTTCATATAAGGCTGATGTCTATAGTTTTGGAATGCTATTGATGGAAATGGCAAGTAGGAGGAAGAACTTGAATGCAGATGCAGAGCATTCAAGCCAGCTTTACTTTCCCCTGTGGATTTATGATCAattcaatgaagaaaaagaaatagaaatggaATATATCACTATGGAGGAAAAAGATATTGCAAAGAAGATGTTCATAGTTGCACTATGGTGTATACAATTGATGCCCTGTGATCGTCCTTCTATGAATAGAGTAGTAGAGATGCTcgaagaaaatattgaatctCTGGAATTGCCCCCAAAGCCTGCTCTATTTCCGCGTGAAACAATTGAACAGAATGAGGACTCTTGCCCAGAAGAACCAAGTCACTCAACTAATTCCAACACTTATCTCCAGGAAGATGCAACTGTTCCTTCACTAGAAAATTCTGCATA 1277 0.3406 MSKGTGLLQIIGVEASWNYYYGVLYSRTDLGLVMGEVTGHYIPPYFAARFLLGITFLFWLLTYTWRRRHISVYRDIEEFLEDNNLMPIRYSYNEIKKMTRGFRDKLGEGGFGSVYKGKLRSGPFVAVKMLGKAKANGQEFISEVATIGRIHHTNVVQLIGFCFEGSKHALIYEFMPNGSLDKYVFSKEISVFLSYEEMYAISIGVAHGIAYLHQGCNMQILHFDIKPHNILLDKNFIPKVSDFGLAKLYPIDDSIVTLTAARGTIGYMAPELFYDNIGGVSYKADVYSFGMLLMEMASRRKNLNADAEHSSQLYFPLWIYDQFNEEKEIEMEYITMEEKDIAKKMFIVALWCIQLMPCDRPSMNRVVEMLEENIESLELPPKPALFPRETIEQNEDSCPEEPSHSTNSNTYLQEDATVPSLENSA 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00375 425 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Bva11g00375 425 Pfam Protein tyrosine and serine/threonine kinase 103 370 IPR001245 GO:0004672|GO:0006468
Bva11g00375 425 MobiDBLite consensus disorder prediction 381 425 - -
Bva11g00375 425 MobiDBLite consensus disorder prediction 400 425 - -
Bva11g00375 425 PANTHER RUST RESISTANCE KINASE LR10-RELATED 40 400 IPR045874 GO:0004672
Bva11g00375 425 ProSiteProfiles Protein kinase domain profile. 100 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00375 425 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 40 400 - -
Bva11g00375 425 Gene3D Transferase(Phosphotransferase) domain 1 175 384 - -
Bva11g00375 425 SMART serkin_6 100 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00375 425 Gene3D Phosphorylase Kinase; domain 1 75 174 - -
Bva11g00375 425 ProSitePatterns Protein kinases ATP-binding region signature. 106 128 IPR017441 GO:0005524
Bva11g00375 425 SUPERFAMILY Protein kinase-like (PK-like) 86 371 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00375 Bva-Chr11 7482092 7485067 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00375 89 397 Receptor kinase-like Gene Family AT5G38280 52.050 1.22e-108 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bva11g00375 PK_Tyr_Ser-Thr 5.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00375 - - gmx:100305367 562.762