Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00373 ATGATTTCGCATCCTTACCACTCCATGTTGGTTGTCCTATTGGTGCTGCTAATGAATCTATGGTGCGGTTACAGTGATTGCCAGGAATATAGATGTGGGGATGATGGCCCTCCTATTCGATTTCCCTTCTATCTCATCCACGGCAAGACTGATCAAACTAGCTATCCCGAAGGCTTTGGTCAAACTTGCACGGATAAAGATCAGACAATCCTTGAGCTCTCAAATATAACATTCTTAGTCGATAAAATAGATTATTACCGTCAATATGTATCCCTAAGGAACCCTGAAAATTGCCTTGCCATGCAATTCCTAAACATCAAccactcttcaatttttcctcTTCAATTTGATGTTGAAAACAGTAACCTTACTTTCTTCAACTGTTCTTCACTAGGACAACAGAAACTGAAAAGCCTATACACAAGGTATTCATCTTACCAAGATCCGTTCTGCCCAATTTATGTCGCCGAATCCTTCTATGATATCGTTGACATGGACGTAGTATCTTGCATTAAGATGTTTGATGTTACAATAGACCTGTCGTACTGGTTCTTCATTTATAATCACAGTACATTATTGACATGGTCAACACCAAATTGTAGCATGTGCGAATCGCAAGGCATGCAATGCAAACTGAAAAACAATTGGTCTGATGGTGAAATTGAGTGTTTCACTTGCCATAAAAACAGGACTCCTACGTCAAGGATTCTAATTGCTGCAGGTGTAATAGGTCCAGTCCTTTTGGTGCTATTGGTCATTGCGTTGTTTCACATctataattgttataaaacaaaaggtgAAGATCAGGCAAGAGTGGAAAATTTTTTGGAAGATTACAGGTCTCAAAAGCCTACAAGATTCTCATTTGCTGATATTAAGAGAATCACTAATGGTTTTAAGGAAAAGTTGGGTGAAGGAGCTCATGGAGCTGTCTTCAAAGGTAAGTTGTCTGAAGAAATTATTGTGGCTGTGAAGATACTCAATAATACAGAAGGAGATGGGAAAGAATTCATCAACGAAGTGGGAACTATGGGAAAAATCCATCATGTCAATGTGGTTCGCTTGCTTGGCTTTTGTGCTGATGGAGTTCACCgtgcttttatttatgatttctttccAAATGGTTCACTGCAAAACTTCATAACTCCACCAGACAATAAGCTCGTGTTCCTTGGTTGGCAAAAGCTGGAACAAATTGCTCTTGGTGTGGCTAAAGGGATCGAATATCTTCATCAAGGATGTGATCAGCgaattcttcactttgacattaaTCCACATAATGTGTTACTTGATGAGAATTTTATCCCCAAAATTTCCGATTTTGGTCTAGCCAAATTATGTTCTAAAAATCGAAGCACGGTGTCAATGACTGCAGCTAGAGGAACCTTAGGTTATATTGCACCAGAAGTTTTCTCTAGAAATTTTGGAAATGTCTCCTATAAGTCTGATATTTATAGTTATGGAATGTTGTTATTAGAAATGGTAGGAGGAAGAAAGAATACAAACACAAATCAGGaaacttttaaagttttgtaCCCAAAATGGATCCATAGTTTACTTGAGGGGGGAGAAGATGTACGCATCCATATTGAGAACGAGGGAGATACTGAAATTGCAAAGAAACTTGCAATTACAGGACTTTGGTGCATTCAATGGCATCCGACAAACCGTCCATCCATGAAAACTGTATTGCTGATGCTGGAAGGAAAGGAAGATAAGTTGAAGGTGCCTCCTAATAATTTTGGCTCATCTAGAAGAAGTGCAATTATTCCAGCAACACATGTTAAGATGGAGTTGGAAGTGATCCATGAACTAGAGTA 1820 0.3698 MISHPYHSMLVVLLVLLMNLWCGYSDCQEYRCGDDGPPIRFPFYLIHGKTDQTSYPEGFGQTCTDKDQTILELSNITFLVDKIDYYRQYVSLRNPENCLAMQFLNINHSSIFPLQFDVENSNLTFFNCSSLGQQKLKSLYTRYSSYQDPFCPIYVAESFYDIVDMDVVSCIKMFDVTIDLSYWFFIYNHSTLLTWSTPNCSMCESQGMQCKLKNNWSDGEIECFTCHKNRTPTSRILIAAGVIGPVLLVLLVIALFHIYNCYKTKGEDQARVENFLEDYRSQKPTRFSFADIKRITNGFKEKLGEGAHGAVFKGKLSEEIIVAVKILNNTEGDGKEFINEVGTMGKIHHVNVVRLLGFCADGVHRAFIYDFFPNGSLQNFITPPDNKLVFLGWQKLEQIALGVAKGIEYLHQGCDQRILHFDINPHNVLLDENFIPKISDFGLAKLCSKNRSTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTNTNQETFKVLYPKWIHSLLEGGEDVRIHIENEGDTEIAKKLAITGLWCIQWHPTNRPSMKTVLLMLEGKEDKLKVPPNNFGSSRRSAIIPATHVKMELEVIHELE 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00373 606 Pfam Protein kinase domain 300 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00373 606 ProSitePatterns Protein kinases ATP-binding region signature. 303 325 IPR017441 GO:0005524
Bva11g00373 606 ProSiteProfiles Protein kinase domain profile. 297 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00373 606 PANTHER RECEPTOR-LIKE KINASE 23 604 - -
Bva11g00373 606 Gene3D Transferase(Phosphotransferase) domain 1 372 581 - -
Bva11g00373 606 Pfam Wall-associated receptor kinase galacturonan-binding 27 92 IPR025287 GO:0030247
Bva11g00373 606 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 604 IPR045874 GO:0004672
Bva11g00373 606 SUPERFAMILY Protein kinase-like (PK-like) 278 569 IPR011009 -
Bva11g00373 606 Gene3D Phosphorylase Kinase; domain 1 270 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00373 Bva-Chr11 7466788 7468718 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00373 240 578 Receptor kinase-like Gene Family AT1G66910 46.348 2.22e-98 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Bva11g00373 Pkinase 9.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00373 - - gmx:100811907 687.952