Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00344 atggCTGAGGCTGTCCTTGAAGTTCTTTTGGAGAATTTGAGCTCATTCATTCAGAAGGAGCTGGGATTATTCCTGGGTATCAATCAAGAGCTTAAACGGCTTTCTAGTATGCTCTCTACTGTCCGGGCTGTGCTTGAAGACGCTGAGGAGAAGCAATTCTCAGACAGGGCCATACAGAATTGGCTTCAGAAGCTGAAAGATGCTGTTCATGCTCTAGATGACATCCTCGACTTGTGTGCCATAAGTGCATCACAAAACAAGGTACCAAGTTcttgtttttcctctttttatcCCAAGAATGTTCTGTTCCGCCATAAAATTGCTCGCCAAATGAAAGAGATAAGGGAGGGTTTAGATGAAATTGCTGAAGAAAGGAGGAAGTTTCATCTCTGTGAGAACGTTAGTGGAGTGAATGAAGTGAAGGAATGGCGTCAAACCACCTCTATCATTACTCAACCTGAAGTGTTTGGAAGGGAAATGGATAAGTTAAAAATGGTACACTTTTTGGTTGAGCAAGCTAGCAATATTGATATTGAGAGAGATGTTTTTGGAAACATTATGTGTTTCAAAATGCATGATTTGATGCATGATCTAGCCCAATCAGTTATGGAGGAAGCATGTCATATTGGGGATAATGGAAGCTTAACTGTGTTATCAAGAACTCGCCATATCTCATTTATAGGTTGCAATGAACAATTAGCTGACCTACTTAATTCAATGCACAAAGTCCAACACTTTAGGACctgcttatttttttcaccAGCTCCTCCTTACTCTGCATCTGAACTAATGAAATTCTCTTCTTTGCGAGTACTTCACATGGGAATTAATATGGGTCTGGCCAAGTTTCCATCTTCAGTCATAAACCTAAAACATATAAGGTACTTAAATCTTTCTCATAGTAATTTTAAGACACTCCCAGATTCCCTTTGTAGCTTGCAGTATTTGCAAGTGCTGAATTTAGATGACTGCCGTGCTCTTGAAAAGTTACCTAACCGCATGAGATACCTTGGAGCTATGAGACACCTATTTTTGAGAAGGTGTACATCATTATCTAGCATGCCTCCTAATATAGGTCAACTAACTTGCTTGagaacattaaatattttcacaattgGTAGGAAGAAAGGTTTCTTGTTGGATGAATTGAAGCAATTGAATCTTAAGGGAGAGCTCCATATTAAACACCTGGAGAGGATAAGAAGTGTGATGGATGCTGAAGAAGCGAATTTGGCTGATAAGGACCTGCACGAATTGTTGTTGTCATGGGGCAGAAATGATGAATCAGAATTGGAACAAAATGTTGAGCACATACTTGAGGCCCTTAAACCAAAtctcaaacttaaaattttgggcATAGGAGGATATAAAGGCGTTCATTTCCCTCAGTGGATGGGTAATCCAACTTTAGATTATTTATGTTCATTGTATATTGTAGATTGCAAGAACTGTTTGCAGCTTCCTCCACTTCATAAACTACCTTCTCTAAAAGGCCTTACATTGCATAATATAAATCTTGTGCAGTACATCAATGATGAGACATGTGATGGTGGAGTTCTTAGAGGTATGAGGTCTTTGGGGTATTTGAAGATCAGTGATTTACCAAACTTGGAAGGGTTATCTAAAGAGGAGGGAGTACAAATATTCCCCAATCTCTgcacatttattatttctgaATGCCCCAAATTCGTACTGCCTCCCCTTCCATCTGTCAGAGAACTAGTGATGAAGTGCAATGGTGTGGTTTTGGGCTCAATTCATAATCTTCATGCCCTTAAATCGTTGTGGCTTTATGGTGACTTTGAGCTGACTTCCTTTCCAGATGTAAGGCTTGGAGACGTTACTTCTCTCAAGGAACTACACATCTTTGCATGTACCAATGTTAAAATTCTTCCAATTGCGCTCTCTAGCCTCAGTGCCCTGGTGGAATTGcatattgaaaaatgttttgagCTTGAGTCTCTTCCGGCACAAGTTTTTCAGGGGTTGCACTCTCTACAACGATTAAAGGTTGGTTGGTGTAATAAGCTTAAATTCTTCTCTGATGGGTTTCAGTACCTGTCCTCTCTGAAAGAGCTGATGATTGTAAGTTGTCCAGAAGTGATGGTTTTACCAGAAACTTTGCAATTCACCTCTTCCTTGCagtcattatatttatttgggCTTCCAAATCTTACAGTGTTGCCTGACTGGCTGGGAAGCCTTACATGTTTGGAGTCTTTGGAAATTTCTGATTGCCCTAAGTTGAAGTGCATTCCAATGGGCTTGCAATGCATTTCTAACTTGAAGAGTTTGAACATTAGTGCTTGCCCTGAGCTACTGAGACGTTGTGAGGTGGAAACGGGGGAGGATTGGCAGAAGATAGCACATATTCTACATGTAAATCTCAGAAGAGGAATCAACATAAACCCCATGATAACCCCTATGGGGTTTCCCATCAATCTAAGAGTTGAAGATCCGTTCTTCTCAAAGACTATATTGGAGCATGAACATGCTGCGCGTACTTCAATTGTCCAAAGTTTTCAATATTGTTGCTA 2537 0.3839 MAEAVLEVLLENLSSFIQKELGLFLGINQELKRLSSMLSTVRAVLEDAEEKQFSDRAIQNWLQKLKDAVHALDDILDLCAISASQNKVPSSCFSSFYPKNVLFRHKIARQMKEIREGLDEIAEERRKFHLCENVSGVNEVKEWRQTTSIITQPEVFGREMDKLKMVHFLVEQASNIDIERDVFGNIMCFKMHDLMHDLAQSVMEEACHIGDNGSLTVLSRTRHISFIGCNEQLADLLNSMHKVQHFRTCLFFSPAPPYSASELMKFSSLRVLHMGINMGLAKFPSSVINLKHIRYLNLSHSNFKTLPDSLCSLQYLQVLNLDDCRALEKLPNRMRYLGAMRHLFLRRCTSLSSMPPNIGQLTCLRTLNIFTIGRKKGFLLDELKQLNLKGELHIKHLERIRSVMDAEEANLADKDLHELLLSWGRNDESELEQNVEHILEALKPNLKLKILGIGGYKGVHFPQWMGNPTLDYLCSLYIVDCKNCLQLPPLHKLPSLKGLTLHNINLVQYINDETCDGGVLRGMRSLGYLKISDLPNLEGLSKEEGVQIFPNLCTFIISECPKFVLPPLPSVRELVMKCNGVVLGSIHNLHALKSLWLYGDFELTSFPDVRLGDVTSLKELHIFACTNVKILPIALSSLSALVELHIEKCFELESLPAQVFQGLHSLQRLKVGWCNKLKFFSDGFQYLSSLKELMIVSCPEVMVLPETLQFTSSLQSLYLFGLPNLTVLPDWLGSLTCLESLEISDCPKLKCIPMGLQCISNLKSLNISACPELLRRCEVETGEDWQKIAHILHVNLRRGININPMITPMGFPINLRVEDPFFSKTILEHEHAARTSIVQSFQYCC 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00344 845 Gene3D Ribonuclease Inhibitor 207 376 IPR032675 -
Bva11g00344 845 Gene3D Ribonuclease Inhibitor 378 573 IPR032675 -
Bva11g00344 845 SUPERFAMILY RNI-like 492 802 - -
Bva11g00344 845 PANTHER OS10G0130600 PROTEIN 184 686 - -
Bva11g00344 845 PANTHER DISEASE RESISTANCE PROTEIN RP 184 686 IPR044974 GO:0006952
Bva11g00344 845 Coils Coil 31 51 - -
Bva11g00344 845 SUPERFAMILY L domain-like 190 567 - -
Bva11g00344 845 Gene3D - 5 127 - -
Bva11g00344 845 Pfam Rx N-terminal domain 5 94 IPR041118 -
Bva11g00344 845 CDD RX-CC_like 2 123 IPR038005 -
Bva11g00344 845 Gene3D Ribonuclease Inhibitor 580 779 IPR032675 -
Bva11g00344 845 Coils Coil 107 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00344 Bva-Chr11 7196012 7201609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00344 588 775 WRKY Transcription Factor Family AT4G12020 27.128 1.09e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00344 - - mtr:MTR_5g035280 530.791