Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00342 ATGGCTGAGGCTATCCTTGAAGTTCTTCTGGAGAATTTGAGCTCATTCGTCCAGAAAGAGCTTGGATTATTTCTTGGTATCAATCAAGAACTAAAAAGGCTTTCTAGTATTCTCTCTACAGTCCGGGCTGTGCTTGAAGACGCTGAGGAGAAGCAATTCTCAGACAGGGCCATACAGAATTGGCTTCAGAAGCTGAAAGATGCTGTTCATGCGCTAGATGACATCCTCGACTTGTGTGCCATAAGTGCATCTCAAAACAAGGTACCGAGTTcttgtttttcctctttttatcCCAAGAACGTTCTGTTCCGCCATAAAATTGCTCAGCAAATGAAAGAGATAAGGGAGGCTTTAGATGAAATTGCTGAAGAAAGGAGGAAGTTTCATCTTTGTGAGAAAGTTAGTGGAGTGAATGAAGTGAAAGAATGGCGTCAAACCACCTCTATCATTACTCAACCTGAAGTGTATGGAAGGGAAATGGATAAGTTAAAAATGGTAGACTTTTTGGTTGAGCAAGCTAGCAATATTGGCGATGCTTTACCAGAAGCATGTCATATTGGGGACAATGGACTCTTAACTGTGTCATCAAGAACTCGCCATGTCTCGTTTACAGGTTGCAATGAACAATTAGCTGACCTACTTAATTCTTTGCACAAAGTTGAACACTTCAGGACCTGCTTATTTTTATCACCGGCTCCTCATTACTATGCATCTGAGCTAATGAAATTCTCTTCTTTGCGAGTACTTCACATGGGAAACAATATGGGTCTGGCCAAGTTTCATTCTTCAATCATAAACTTAAAACATATAAGGTACTTAAATCTTTCTCACAGTAATTTTAAGACACTCCCAGATTCCCTTTGTAGCTTGCAGTATTTGCAAGTTCTGAATTTGGATGACTGCCGTGCTCTTGAAAAGTTACCTAACCTCATGAGATGCCTTGGAGCTCTCAGACATCTATTTTTGAGAAGGTGCACATCATTATCTAGCATGCCTCCTAATGTAGGTCAACTAACATGCTTGAGaaccttaaatattttcacaattgGTAGGAAGAAAGGTTTCTTGTTGGATGAATTGAAGCACTTGAATCTTAAGGGAGAGCTCCATATTAAACACCTAGAGAGGATAAGAAGTGTGATGGATGCTAAACAAGTGAATTTAGCAGATAAGGACCTGCATGAATTGTTGTTGTCATGGGGCAGAAACGATGAATCAGAATTGCAACAAAATGTTGAGCACATACTTGAGGCCCTTAAACCAAATCTCAAACTTAAAGTTTTGGGCATAGGAGGATATAAAGGCGTTCATTTCCCTCAGTGGATGGCTAATCcaacttttgattatttatgttCTTTGTATATTGTAGATTGCAAGAACTGTTTCCAGCTTCCTCCACTTCAGAAACTCCCTTCTCTAAAGGGCCTTACATTGCATAATATAAATCTTGTGCGCTACATCATTGATGAGACATGTGATGGTGGAGTTCTCAGAGGTATGAGGTCTTTGGAGTATTTGATGCTCAGTAATCTACCAAACTTGTTAGGGTTATCTAAAGAGGAAGGAGTACAAATATTCCCCAATCTCTgcacattttatatttttgaatgccCCAAATTGGCACTGCCTCACCTTCCTTCTGTCAGAGAACTACTGATACCAAGATGCAGTGGTGTGGTTTTGGGCTCAATTCATAATCTTCATGGCCTTCAGTCGTTGTGGCTTTGTTGTGAGCATGAGCTGACTTCCTTTCCAGATGCGATGCCTGGAGACCTTACATCTCTGAAGGAACTACACCTCTTTTCATGTAGCAAACTTAAAATACTGCCAAGTGAGCTCTCAAGCCTCTGTGCCTTGGAGGAACTACATATTGAAAACTGTTATGAGCTTGAGTCACTTCCGGAACAAATTTTGCAGGGGTTACACTCTCTCCAAAGATTGAAGGTTGGTTGGtgtaataaacttaaattcttCAGTGATGGTTTTCAGTACCTCACCTCTCTGAAAGAGTTGATGATTGTAAGTTGTCCTGAAGTGAGAATTTTACCTGAATCCTTGCAATTCACCTCTTCCCTGCAATCTATATCTTTATATGGACTTCCAAAACTTTCATTGTTGCCTGACTGGCTGGGAAGCCTTACGTCTTTGCAGTCTTTGGAAATTTCTGATTGCCCCAAGTTGAAGTGCATTCCAATGAGCGTCCAATGCATTTCTAACTTGAAGAGTTTGAACATTAGTGCTTGCCCTGAGCTACTGAGACATTGTGAGGAGGAAACGGGGGAGGATTGGCCGAAGATAGCACATATTCCCCATGTAAATCTCAGAAGCGGAATCAACTTAAGCCCCACGATATCTTGTAAAGGTTTTCCCATAAATCTCAGAGTTGAAGATCCCTTTTTCTCGAAGGCTTTATTGGAGCGTGAAAATGCTTTGCGTACTTCAGATGTGTACAAGCTGCAAATATGCAATGTAGATTCTGAGGCTGAAGAGTTTGATCACTTTAGATATGTGGAAGACCATGCAGACTA 2528 0.396 MAEAILEVLLENLSSFVQKELGLFLGINQELKRLSSILSTVRAVLEDAEEKQFSDRAIQNWLQKLKDAVHALDDILDLCAISASQNKVPSSCFSSFYPKNVLFRHKIAQQMKEIREALDEIAEERRKFHLCEKVSGVNEVKEWRQTTSIITQPEVYGREMDKLKMVDFLVEQASNIGDALPEACHIGDNGLLTVSSRTRHVSFTGCNEQLADLLNSLHKVEHFRTCLFLSPAPHYYASELMKFSSLRVLHMGNNMGLAKFHSSIINLKHIRYLNLSHSNFKTLPDSLCSLQYLQVLNLDDCRALEKLPNLMRCLGALRHLFLRRCTSLSSMPPNVGQLTCLRTLNIFTIGRKKGFLLDELKHLNLKGELHIKHLERIRSVMDAKQVNLADKDLHELLLSWGRNDESELQQNVEHILEALKPNLKLKVLGIGGYKGVHFPQWMANPTFDYLCSLYIVDCKNCFQLPPLQKLPSLKGLTLHNINLVRYIIDETCDGGVLRGMRSLEYLMLSNLPNLLGLSKEEGVQIFPNLCTFYIFECPKLALPHLPSVRELLIPRCSGVVLGSIHNLHGLQSLWLCCEHELTSFPDAMPGDLTSLKELHLFSCSKLKILPSELSSLCALEELHIENCYELESLPEQILQGLHSLQRLKVGWCNKLKFFSDGFQYLTSLKELMIVSCPEVRILPESLQFTSSLQSISLYGLPKLSLLPDWLGSLTSLQSLEISDCPKLKCIPMSVQCISNLKSLNISACPELLRHCEEETGEDWPKIAHIPHVNLRSGINLSPTISCKGFPINLRVEDPFFSKALLERENALRTSDVYKLQICNVDSEAEEFDHFRYVEDHAD 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00342 842 Coils Coil 31 51 - -
Bva11g00342 842 Gene3D Ribonuclease Inhibitor 686 791 IPR032675 -
Bva11g00342 842 Gene3D - 6 122 - -
Bva11g00342 842 CDD RX-CC_like 2 123 IPR038005 -
Bva11g00342 842 SUPERFAMILY L domain-like 192 539 - -
Bva11g00342 842 Pfam Rx N-terminal domain 6 96 IPR041118 -
Bva11g00342 842 SUPERFAMILY L domain-like 543 771 - -
Bva11g00342 842 Gene3D Ribonuclease Inhibitor 352 540 IPR032675 -
Bva11g00342 842 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 235 656 - -
Bva11g00342 842 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 630 751 - -
Bva11g00342 842 SMART LRR_typ_2 616 640 IPR003591 -
Bva11g00342 842 SMART LRR_typ_2 314 338 IPR003591 -
Bva11g00342 842 SMART LRR_typ_2 267 290 IPR003591 -
Bva11g00342 842 Gene3D Ribonuclease Inhibitor 541 685 IPR032675 -
Bva11g00342 842 Gene3D Ribonuclease Inhibitor 173 351 IPR032675 -
Bva11g00342 842 Coils Coil 104 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00342 Bva-Chr11 7176158 7180744 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00342 245 352 WRKY Transcription Factor Family AT4G12020 35.780 9.55e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00342 - - mtr:MTR_5g035280 506.908