Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00341 atggCTGAGGCTGTCCTTGAAGTGCTTCTGGAGAATTTGAGCTCATTCATCCATAAGGAGCTGGGATTATTTCTGGGTATCAATCAAGAGCTAAAACGGCTTTCTATTATGCTCTCTACAGTCCGGGCTGTGCTTGAAGATGCTGAGGAGAAGCAATTCTCAGACAGGGCCATACAGAATTGGCTTCAGAAGCTGAAAGATGCTGTTCATGCGCTAGATGACATCCTCGATTTGTGTGCCATAAGTGCATCTCAAAACAAGGTACCAAGTTcttgtttttcctctttttatcCCAACAATGTCCTGTTCCGCCATAAAATTTCTCACCAAATGAAACAGATAAGGGAGGCTTTAGATGAAATTGCTGAAGAAAGGAGGAAGTTTCATCTTTGTGAGAAAGTTAGTTGCAATGAACAACTAGCTGACCTACTTAATTCATTGCACAAAGTCGAACACTTTAGGACTTGCTTATTTTTATCACCAGCTCCTCCTTACTCTGCATCTGAGCTAATGAAATTCTCTTCTTTGCGAGTACTTCACATGGGAAACAATATGGGTCTGGCCAAGTTTCCATCTTCAATCATAAACTTAAAACATATAAGGTACCTAAATCTTTCTCACAGTAATTTTAAGACACTCCCGGATTCCCTTTGTAGTTTGGGGTATTTGCAAGTTCTGAATTTggatgactgtcgtgctcttGAAAAGTTACCTAACCGCATGAGGTGCCTTGGAGCTTTGAGACATCTATTTTTGAGAAGGTGCACATCATTGTCTAGCTTGCCTCCTAATATAGGTCAACTAACATGCTTGAGaaccttaaatattttcacaattgGTAGGAAGAAAGGTTTCTTGTTGGATGAATTGAAGCACTTGAATCTTAAAGGAGAGCTCCATATTAAACACTTGGAGAGGATAAGTGTGAAGGATGCTAAAGAAGTGAATTTGGCGGATAAGGACCTGCATGAATTGTTGTTGTCTTGGGGCAGAAATGATGAATCAGAATTGCAACAAAATGTTGAGCACATATTTGAGGCCCTTAAACCAAATCTCAAACTTAAAGTTTTGGGTGTAGGGGGATATAAAGGTGTCCGTTTCCCTCAGTGGATGGGTAACCCATGTTTGGATAATCTTTGTTCTCTGTATATTGCAGATTGCAAAAACTGTTTGCAGCTTCCTCCACTACATAAACTACCTTCTCTAAAGGGCCTTACATTGCATAATATAAATCTTTTGCAGTACATCAATGATGAGACATGTGATGGCGGTGTTTCCAGAGGTATGAGGTCTTTGGAGTATATGGTGCTCAGTGATTTACCAAACTTGGAAGGGATATCAAAAGAGGAAGGAGAACAAATATTCCCCCGTCTCTACACCTTATGTATTAATGAATGCCCCAAATTGGCCTTGCCTTGCCTTCCATCTGTTAGAGTAATAGTCATATCAAGATGCAGTGAATTTTTATTGAGCTCAATTCATTATATTCATGGCCTTCAATCATTGTGGCTTTGTTGTGAAGAAGAGCTATCATCCTTTCAAGATGCAATCCTTGGAGAGCTTACTTATCTTACGGAACTACACATCTATTCATGTATCAATCTTAAAATTCTTCCAATTGAGCTCTCTAGCCTCCGTGCCCTGGTGGAATTGAATATTGAAAACTGTCATGAGCTTGAGTCTCTTCCGGAACAAGTTTTTCAGGGGTTGCACTCTCTACAACGATTGAAGGTTGGTTGGTGTAATAAGCTTAAATTCTTCTCTGATGGGTTTCAGTACCTCTCCACTCTCAAAGAGTTGATGATTGTAAGTTGTCCAGAAGTGATGATTTTACCAGAAACTTTGCGATTCACCTCTTCCTTGCAGTCATTACATTTATATGGGCTTCCAAATCTTACAGTGTTGCCAGACTGGCTGGGAAGCCTTACATGTTTGCAGTCTTTGGAAATTTCTGATTGCCCCAAGTTGAAGTGCATTCCAATGGGCTTCCAATGCATTTCTAACTTGAAGTATTTGAACATTAGTGCTAGCCCTGAGCTACTGAGACGTTGTGAAGTGGAAACTGGGGAGGATTGGCAGAAGATAGCACATATTCCACATGTAAATCTCAGAAGAGGAATAAGCATAAACCCCGGGATAACCCCTGTAGGTTTTCCCATCAATGTAAGAGTTGATGATCCGTTCCTTTCCAAGACTTTATTGGAGCATGAAAATTATGCGCGTTGTCAAACTCGTGAACCTGAAGTCGTAGATTTTTCTGAGGTTGAAGTTGGGAGCAAATACACCACCGTTTGCCTGAGGTCCAGTATATCGAAATCAAGCTGTGTTGCAGGACTGATTGGAGAAAGCTCCATACGAAGCCAAGAttgcaagaaaaatgaaggTGGCTTAATAAAATGTCTGAAGGCAAGCAAGGCAGATGGTGCAGCAAAGAAATGGAAAGATTGGCAAAAGATCCCcctattatattttgtcatcAATCTCAGAGaTGCCCACGAATTTCGTAAGTGCTGGTCCACTATATTCAAATTGAGTAATGCTGCATTACTGACAGTTGCAGACTTGCAAGGCAAATATTG 2579 0.392 MAEAVLEVLLENLSSFIHKELGLFLGINQELKRLSIMLSTVRAVLEDAEEKQFSDRAIQNWLQKLKDAVHALDDILDLCAISASQNKVPSSCFSSFYPNNVLFRHKISHQMKQIREALDEIAEERRKFHLCEKVSCNEQLADLLNSLHKVEHFRTCLFLSPAPPYSASELMKFSSLRVLHMGNNMGLAKFPSSIINLKHIRYLNLSHSNFKTLPDSLCSLGYLQVLNLDDCRALEKLPNRMRCLGALRHLFLRRCTSLSSLPPNIGQLTCLRTLNIFTIGRKKGFLLDELKHLNLKGELHIKHLERISVKDAKEVNLADKDLHELLLSWGRNDESELQQNVEHIFEALKPNLKLKVLGVGGYKGVRFPQWMGNPCLDNLCSLYIADCKNCLQLPPLHKLPSLKGLTLHNINLLQYINDETCDGGVSRGMRSLEYMVLSDLPNLEGISKEEGEQIFPRLYTLCINECPKLALPCLPSVRVIVISRCSEFLLSSIHYIHGLQSLWLCCEEELSSFQDAILGELTYLTELHIYSCINLKILPIELSSLRALVELNIENCHELESLPEQVFQGLHSLQRLKVGWCNKLKFFSDGFQYLSTLKELMIVSCPEVMILPETLRFTSSLQSLHLYGLPNLTVLPDWLGSLTCLQSLEISDCPKLKCIPMGFQCISNLKYLNISASPELLRRCEVETGEDWQKIAHIPHVNLRRGISINPGITPVGFPINVRGMSIILFDRNIL 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00341 735 Coils Coil 31 51 - -
Bva11g00341 735 Gene3D Ribonuclease Inhibitor 487 699 IPR032675 -
Bva11g00341 735 SUPERFAMILY RNI-like 428 695 - -
Bva11g00341 735 SMART LRR_typ_2 545 569 IPR003591 -
Bva11g00341 735 SMART LRR_typ_2 399 423 IPR003591 -
Bva11g00341 735 SMART LRR_typ_2 197 220 IPR003591 -
Bva11g00341 735 SMART LRR_typ_2 244 268 IPR003591 -
Bva11g00341 735 Pfam Rx N-terminal domain 5 90 IPR041118 -
Bva11g00341 735 CDD RX-CC_like 2 123 IPR038005 -
Bva11g00341 735 Gene3D Ribonuclease Inhibitor 144 486 IPR032675 -
Bva11g00341 735 Gene3D - 5 122 - -
Bva11g00341 735 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 288 585 - -
Bva11g00341 735 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 168 294 - -
Bva11g00341 735 PANTHER LEUCINE RICH REPEAT CONTAINING PROTEIN 572 676 - -
Bva11g00341 735 SUPERFAMILY L domain-like 156 468 - -
Bva11g00341 735 Coils Coil 104 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00341 Bva-Chr11 7165314 7171230 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00341 175 282 WRKY Transcription Factor Family AT4G12020 38.532 3.72e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00341 - - mtr:MTR_5g035280 469.544