Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00334 ATGGCTGCATCTTCTTCCTCAGCATCCTTGTTTGGAATCAGAGAAGAAGATCAAAATCTGATGAAGCAGCAGCATTCATCAACGCCGTCATCGTCGTCGGCTCCGGCGGCACCACcccagaagaaaaagagaaaccaACCAGGAACACCATATCCAGATGCAGAGGTGATAGCACTATCTCCCAAGACCCTAATGGCAACAAACAGGTTTATATGTGAGGTGTGCAAAAAAGGGTTCCAAAGAGAGCAAAACCTACAGCTTCACAGAAGAGGACACAACCTGCCTTGGAAGCTAAAACAAAAGACTAACAAAGAGCCAAAGAGAAAGGTTTATCTGTGTCCTGAGCCCACATGCGTCCACCATGACCCTTCAAGAGCTCTTGGTGACCTCACAGGGATTAAGAAGCACTATTCTCGCAAACATGGCGAAAAGAAGTGGAAGTGCGAGAAATGCTCGAAGAAATATGCTGTTCAATCCGATTGGAAAGCTCATTCGAAGACTTGTGGAACAAGAGAGTATAGATGCGATTGTGGCACTCTTTTCTCCAGGAGAGATAGTTTCATCACCCACAGGGCTTTCTGTGATGCATTGGCTCAAGAGAGTGCAAGACAGCCACCGAATCTGAGCACCGCCATAGGCAGCCACCTCTACGGTGGCAGCAACATGAGCATAGGCTTATCCAATGTGGGCATTCATGATCAGAACAACCACTCTAGTGACCTTCTCCGACTGGGCGGTGGCGGCGGTCGCACCCGACAATTTGATCACATTCTCCCACCTTCCATGGGCTCCTCCTCATCCTTTAGAACTCCGCAACAAACCATGCCTTCACCGGCATCATTCTTCATGCCGGAATCAAACCAAGCCTACCATGACCAACACCAACGTGGGACAACAACGTTGGTGCTAAACAAACCGTTTCATGGACTAATGCAGTTCTCTGAACTTCAAAACGCCGCCGCGGCCGccatcaacaacaacaatagcTCCCCAACAGGAGCCGCCGCCAATAACACCAACCTCTTCAATCTACCTTTCCTTTACAACTCCAACGCCGGCCCCGGCGACAACCCAAACTCTTTCTCTGGCACCGTCACCGGCGGCAATGAAGGGTCCAGCTTCTTCTCCGGCACTGTAATGGGTGACCAAACAAGCTCCAGCACTGCTCCTTCACTCTTCAGCACATCACTGCAAAACAACAGCGCATTCCCACACATGTCTGCAACCGCTATGCTGCAAAAAGCAGCTCAAATCGGCGCAAGCTCCAGCAACGACAACGGCACCGTTTCGTTGCTTAGAAGCTTCGGAACCTCCTCCTCGAGCAGCGGAGGAGTAGGTGGTGGTGGAGGCTCAAACTCAAAAACAGACCACAAatctccaccaccaccactcATGAACATTGCTTCTTCAAACTACACCAACCTCCAAGACCTAATGAACTCCTTCGCCGGTGGCGGCTTCCAAACCGGCAGGGCTGTAGGGTTAAGCGGCTTCCAAGGCTCTGAAAGGCTCAGCACAAGGGATTTTCTGGGTGTGGGACAAATAGTGAGGAGCATGAGTGGAAGCATTTCGCAGAGAGAGCAACAACAGCCGCAACAAGGGTTTAACTTGAGCTCATTGGAGACAGAAAGAAATGGTTCTGCGCCGTCAGCACAATCTTTTGGACGTGGTGGAGGGAATTTTCAGTG 1688 0.4887 MAASSSSASLFGIREEDQNLMKQQHSSTPSSSSAPAAPPQKKKRNQPGTPYPDAEVIALSPKTLMATNRFICEVCKKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPNLSTAIGSHLYGGSNMSIGLSNVGIHDQNNHSSDLLRLGGGGGRTRQFDHILPPSMGSSSSFRTPQQTMPSPASFFMPESNQAYHDQHQRGTTTLVLNKPFHGLMQFSELQNAAAAAINNNNSSPTGAAANNTNLFNLPFLYNSNAGPGDNPNSFSGTVTGGNEGSSFFSGTVMGDQTSSSTAPSLFSTSLQNNSAFPHMSATAMLQKAAQIGASSSNDNGTVSLLRSFGTSSSSSGGVGGGGGSNSKTDHKSPPPPLMNIASSNYTNLQDLMNSFAGGGFQTGRAVGLSGFQGSERLSTRDFLGVGQIVRSMSGSISQREQQQPQQGFNLSSLETERNGSAPSAQSFGRGGGNFQ 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00334 562 MobiDBLite consensus disorder prediction 521 562 - -
Bva11g00334 562 SMART c2h2final6 70 92 IPR013087 -
Bva11g00334 562 SMART c2h2final6 146 166 IPR013087 -
Bva11g00334 562 SMART c2h2final6 111 141 IPR013087 -
Bva11g00334 562 SUPERFAMILY beta-beta-alpha zinc fingers 69 166 IPR036236 -
Bva11g00334 562 ProSitePatterns Zinc finger C2H2 type domain signature. 72 92 IPR013087 -
Bva11g00334 562 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 1 528 - -
Bva11g00334 562 MobiDBLite consensus disorder prediction 22 39 - -
Bva11g00334 562 Gene3D Classic Zinc Finger 53 118 - -
Bva11g00334 562 MobiDBLite consensus disorder prediction 1 54 - -
Bva11g00334 562 Gene3D Classic Zinc Finger 124 203 - -
Bva11g00334 562 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 1 528 - -
Bva11g00334 562 MobiDBLite consensus disorder prediction 431 469 - -
Bva11g00334 562 ProSiteProfiles Zinc finger C2H2 type domain profile. 70 92 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00334 Bva-Chr11 7073540 7081160 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00334 10 522 IDZ Gene Family AT2G02070 47.029 3.05e-137 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva11g00334 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00334 K25870 - pvy:116141865 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00334 11 7073540 7081160 Bva11g00334 11 7073540 7081160 ECH