Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00332 ATGTCGTCGTTGGTTTCGAGTCTACCCACGAATGATCTACTTGCAAAAACGACGCCGTTTGAATTCAAATGGTGCTGGGACCGTAGCTGTGCTGTCGGCGTTGGGTTCAGTTTCCAGCCAAAGGAGGAAGAACTCATTGGGGTTTTTCTGTTCAACAAGGTTGCCGGAAAAGATGACGTCAGAACGGCAATTATACCGGAATCCGACTTGTACGGAACCAAGAACCCATGGGAGATATGGCAGGAGTTTCTAGAAGATTCTAACTGTAAAGCATTCTCCAGAGATAATAATGAGCTTTACTTGTTCACTGTTCTCAAAAAGAAAGGTCGCAGTAACGCACGGATCGATCGCCGGGTCGGTTTGGGGACATGGGCGGGCGAGGATTCCGCCAAACCCGTATTCAGTGTGACCCGGGAAGGAAAACGAGTTCTGGGATCCAAGAAACGGTACCGTTTTGAGAAGAGAGGGTCTGAACATCATGGTGGCTGGATCATGATCGAATACTCCCTTGATGACTCTTTGTTGCAGCAAATATCAAACCCTAAGAAGCACTTTGTTCTCTGCAAGATCAAGAAGAATGAACGCACTGCACGAGTGGGAACTGGAGAGAAGAAGCCATTGGTGCTGAAGGGTGTTGACgcaacaagagagaaaaatactgGTGATGAGAATAAGAAGGAAATTCTGGATTTGCTTAATGGCAGTTTTCCAGAATTGGTGATTAGCATGGACGAGGTTCTGGCATACTGGAATCATGACATCTCAGATTA 770 0.4545 MSSLVSSLPTNDLLAKTTPFEFKWCWDRSCAVGVGFSFQPKEEELIGVFLFNKVAGKDDVRTAIIPESDLYGTKNPWEIWQEFLEDSNCKAFSRDNNELYLFTVLKKKGRSNARIDRRVGLGTWAGEDSAKPVFSVTREGKRVLGSKKRYRFEKRGSEHHGGWIMIEYSLDDSLLQQISNPKKHFVLCKIKKNERTARVGTGEKKPLVLKGVDATREKNTGDENKKEILDLLNGSFPELVISMDEVLAYWNHDISD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00332 256 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 34 210 - -
Bva11g00332 256 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 34 210 - -
Bva11g00332 256 Gene3D NAC domain 42 197 IPR036093 GO:0003677|GO:0006355
Bva11g00332 256 SUPERFAMILY NAC domain 30 192 IPR036093 GO:0003677|GO:0006355
Bva11g00332 256 Pfam No apical meristem (NAM) protein 34 170 IPR003441 GO:0003677|GO:0006355
Bva11g00332 256 ProSiteProfiles NAC domain profile. 32 193 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00332 Bva-Chr11 7060958 7061728 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00332 31 204 NAC Transcription Factor Family AT5G04410 30.899 1.93e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva11g00332 NAM 1.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00332 - - minc:123202215 142.124