Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00331 ATGATCCACCGGGGAAGGAAACGACGCCGTTTAAATCCAAACATTGTAGGGAGAGTAGTGGCGCTGTTGCTGGGCCTGCGAGGAAGTTTCCAGCCAAGGGAAGAAGAACTCATAGCAGTTTATCTGTTCAACAAGGTTGCCGGGAAAGATGACGTCAGCATGGTGAATATCCCAGACTGTGACCTGTACGGAAACAAGAATCCATGGGAGATATGGCAAGAGTTTCTAGAAGATTCTAACTGCAAATCATTCTCCAGAGACAAGAATGAGCTTTACTTGTTCACTAcccttaaaaagaaagagaacttCCCTTCACGCTTTGATCGTAGGGTCGGTTTAGGGGCCTGGAGATTTGAGGGGGTCACACACTGTATCCAGTATGATCCAGAGAAGAGAACGTGTTGTGGTGGGATCCAAGAAACGCAAATATCAAACCCTAATAAGCACATCGTTCTGTGCAACATCAGGAAGAATGGGGGAACTGCACGAGTGGGAACTGGAGAGAAGAAGCCAATGGAGCTGAAGAGTGCTGTTGCAgcaacagagaaaaagaatggtgatgagaataaaaaggaaattctgGATTTGCTTAATGGCAGATTTCCAGAATTGGTGATTACCATGGACGAGGTTCTATCATACTTGGATCATGACAACTCAGATTA 665 0.418 MIHRGRKRRRLNPNIVGRVVALLLGLRGSFQPREEELIAVYLFNKVAGKDDVSMVNIPDCDLYGNKNPWEIWQEFLEDSNCKSFSRDKNELYLFTTLKKKENFPSRFDRRVGLGAWRFEGVTHCIQYDPEKRTCCGGIQETQISNPNKHIVLCNIRKNGGTARVGTGEKKPMELKSAVAATEKKNGDENKKEILDLLNGRFPELVITMDEVLSYLDHDNSD 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00331 221 Pfam No apical meristem (NAM) protein 29 127 IPR003441 GO:0003677|GO:0006355
Bva11g00331 221 SUPERFAMILY NAC domain 24 129 IPR036093 GO:0003677|GO:0006355
Bva11g00331 221 Gene3D NAC domain 34 142 IPR036093 GO:0003677|GO:0006355
Bva11g00331 221 PANTHER DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 25 195 - -
Bva11g00331 221 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 25 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00331 Bva-Chr11 7057351 7058098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00331 20 128 NAC Transcription Factor Family AT4G27410 32.479 7.38e-07 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva11g00331 NAM 2.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00331 - - cit:107177546 87.4261