Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00330 ATGTCGTCGTCGGAATTGAATCAACCTCCCTTGAATGATCCACCGGTAGAGGAAACGGCGCCGTTTGAATCCAAAGAATGTGGAGAGAGTAGTGGCGCTGTTGCTTGCCCTGTGAGGTTAAGTTTCCAGCCAAGGGAAGATGAACTCATTGCAGTTTATCTGTTTAACAAGGTTGCCGGGAATGATGACGTCGGCCCGGTGAGAATACCAGAATGTGACTTGTACGGAACCAAGAATCCATGGGAGATATTGCAAGAGTTTCTAGAAGATTCTAACTGCGGATCATTCTCCGAGGACAAGAATGAGCTTTACTTGTTCACTACcctaaaaaagaaaggcaCCAGCCCTTCACGCTTTGATCGTACGGTCGGTTTTGGGAGATGGAGAGGTGAGGGGAACATGCAAACTGTATTCAGTATGACCGAGAGAGGAGAACGTGTTGTGGTGGGATCCAAGAAACGGTACCGTTTTGAGAAGAGAGGCTCTGAACATCATCGTACCTGGTTCATGGTGGAATACTCACTTGCCAATTCTTTGCTGCAGCAAATACCAAACCCTAATACGCACATTGTTCTCTGCATGATCAAGAAGAATGTACGAGTGGGTACTGAAGAGAACAAGCCATTGGAACTGAATGATGCTGATGCAGCAACAAAGCAAAGGAACGGCGATGGGAAAGATAATTG 686 0.4563 MSSSELNQPPLNDPPVEETAPFESKECGESSGAVACPVRLSFQPREDELIAVYLFNKVAGNDDVGPVRIPECDLYGTKNPWEILQEFLEDSNCGSFSEDKNELYLFTTLKKKGTSPSRFDRTVGFGRWRGEGNMQTVFSMTERGERVVVGSKKRYRFEKRGSEHHRTWFMVEYSLANSLLQQIPNPNTHIVLCMIKKNVRVGTEENKPLELNDADAATKQRNGDGKDN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00330 228 MobiDBLite consensus disorder prediction 1 24 - -
Bva11g00330 228 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 37 209 - -
Bva11g00330 228 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 37 209 - -
Bva11g00330 228 Pfam No apical meristem (NAM) protein 39 175 IPR003441 GO:0003677|GO:0006355
Bva11g00330 228 ProSiteProfiles NAC domain profile. 36 198 IPR003441 GO:0003677|GO:0006355
Bva11g00330 228 MobiDBLite consensus disorder prediction 206 228 - -
Bva11g00330 228 Gene3D NAC domain 46 201 IPR036093 GO:0003677|GO:0006355
Bva11g00330 228 SUPERFAMILY NAC domain 32 197 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00330 Bva-Chr11 7054230 7054916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00330 35 183 NAC Transcription Factor Family AT1G71930 29.801 5.13e-11 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva11g00330 NAM 2.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00330 - - aprc:113871407 121.324