Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00327 ATGTCGTCGTTGGTTTCGAGTCTACCCACGAATGATCCACTTGCAAAAACGACGCCGTTTGAATTCAAACTGTGCTGGGACCGTAGCTGTGCTGTCGGCGTTGGGTTCAGTTTCCAGCCAAAGGAGGAAGAACTCATTGGGGTTTTTCTGTTCAACAAGGTTGCCGGAAAAGATGACGTCAGCACGGCGATTATACCGGAATCCGACTTGTATGGAACCAAGAATCCATGGGAGATATGGCAGGAGTTTCTTGAAGATTCTAACTGTAAAGCATTCTCCAGAGATAATAATGAGCTTTACTTGTTCACTGTTCTCAAAAAGAAAGGTCGCAGTAACGCACGGATCGATCGCCGGGTCGGTTTGGGGACATGGGCGGGCGAGGATTCCGCCAAACAGATATCCAGTGTGACCCGGGAAGGAAAACGAGTTCTGGGATCCAAGAAACGGTACCGTTTTGAGAAGAGAGGGTCTGAACATCATGGTGGCTGGATCATGATCGAGTACTCCCTTGATGACTCTCTGTTGCAGCAAATATCCAACCCTAATAAGCACTTTGTTCTCTGCAAGATCAAGAAGAATGAACGAACTGCACGAGTGGGAACTAGAGAGAAGAAGCCATTGGAGCTGAACGGTGTTGATGcagtaagagagaaaaagaatggtGATGAGAATAAGAAGGAATTTCTGGATTTGCTTAATGGCAGTTTTCCAGAATTGGTGATTAGCATGGATGAGGTTCTGGCATACTGGAATCATGACATCTCAGATTA 770 0.4519 MSSLVSSLPTNDPLAKTTPFEFKLCWDRSCAVGVGFSFQPKEEELIGVFLFNKVAGKDDVSTAIIPESDLYGTKNPWEIWQEFLEDSNCKAFSRDNNELYLFTVLKKKGRSNARIDRRVGLGTWAGEDSAKQISSVTREGKRVLGSKKRYRFEKRGSEHHGGWIMIEYSLDDSLLQQISNPNKHFVLCKIKKNERTARVGTREKKPLELNGVDAVREKKNGDENKKEFLDLLNGSFPELVISMDEVLAYWNHDISD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00327 256 Pfam No apical meristem (NAM) protein 34 170 IPR003441 GO:0003677|GO:0006355
Bva11g00327 256 SUPERFAMILY NAC domain 31 192 IPR036093 GO:0003677|GO:0006355
Bva11g00327 256 ProSiteProfiles NAC domain profile. 32 193 IPR003441 GO:0003677|GO:0006355
Bva11g00327 256 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 34 206 - -
Bva11g00327 256 Gene3D NAC domain 42 197 IPR036093 GO:0003677|GO:0006355
Bva11g00327 256 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 34 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00327 Bva-Chr11 7045385 7046155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00327 31 197 NAC Transcription Factor Family AT5G04410 31.579 1.87e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva11g00327 NAM 4.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00327 - - minc:123202215 144.821