Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00325 ATGTCATCGTCGGATTTGAATCAACCTCCCTTGAAGGATCCACCGGTGAAGGAAACGACGCCGTTTGAATCCAAAGAATGTAGGGAGAGTAGTGGCGCTGTTGCTGGGCCTGAGAGGTTAAGTTTCCAGCCAAGGGAAGAAGAACTCATTGCAGTTTATCTGTTCAACAAGGTTGCAGGGAAAGATGATGTCAGCATGGTGAAAATACCAGAATGTGACTTGTACGGAACCAAGAATCCATGGGAGATATGGCAAGAGTTTCTAGAAGATTCTAACTGCAAATCATTCTCCAGAGACAAGAATGAGCTTTACTTGTTCACTAcccttaaaaagaaagagaacttCCCTTCACGCTTTGATCGTAGGGTCGGTTTAGGGGCCTGGAGATTTGAGGGGGGCACACACACTGTATCCAGTAAGACCCAGAGAAGAGAACGTGTTGTGGTGGGATCCAAGAAACGGTACCGTTTTGATAAGAGAGGGTCTGAACATCATGGTGGCTGGATCATGATGGAGTACTCCCTTGATGACTCTTTGTTGCAGCAAATATCAAACCCTAATGAGCACATCGTTCTCTGCAAGATCAGGAAGAATGGTCGAACTGCACGAGTGGGAACTGGAGAGAAGAAGCCCTTGGAGCTGAAGGATGCTGTTGCAGcaatagataaaaagaatgGTGATGAGAATAAGAAGGAAATTCTGGACTTGCTTAATGGCAGATTTCCAGAATTGGTGATTAGCATGGACGAGGTTCTATCATACTTGGATCATGACAACTCAGATTA 785 0.4357 MSSSDLNQPPLKDPPVKETTPFESKECRESSGAVAGPERLSFQPREEELIAVYLFNKVAGKDDVSMVKIPECDLYGTKNPWEIWQEFLEDSNCKSFSRDKNELYLFTTLKKKENFPSRFDRRVGLGAWRFEGGTHTVSSKTQRRERVVVGSKKRYRFDKRGSEHHGGWIMMEYSLDDSLLQQISNPNEHIVLCKIRKNGRTARVGTGEKKPLELKDAVAAIDKKNGDENKKEILDLLNGRFPELVISMDEVLSYLDHDNSD 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00325 261 Pfam No apical meristem (NAM) protein 39 175 IPR003441 GO:0003677|GO:0006355
Bva11g00325 261 MobiDBLite consensus disorder prediction 1 37 - -
Bva11g00325 261 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 41 225 - -
Bva11g00325 261 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 41 225 - -
Bva11g00325 261 Gene3D NAC domain 46 203 IPR036093 GO:0003677|GO:0006355
Bva11g00325 261 ProSiteProfiles NAC domain profile. 36 198 IPR003441 GO:0003677|GO:0006355
Bva11g00325 261 SUPERFAMILY NAC domain 40 197 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00325 Bva-Chr11 7039425 7040210 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00325 31 191 NAC Transcription Factor Family AT3G61910 32.317 8.70e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva11g00325 NAM 2.4e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00325 - - aprc:113871407 133.65