Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00322 ATGTCGTCGTTGGTTTCGAGTCTACCCACGAATGATCCACTTGCAAAAACGACGCCGTTTGAATTCAAACTGTGCTGGGACCGTAGCTGTGCTGTCGGCGTTGGGTTCAGTTTCCAGCCAAAGGAGGAAGAACTCATTGGGGTTTTTCTGTTCAACAAGGTTGCCGGAAAAGATGACGTCAGCACGGCGATTATACCGGAATCCGACTTGTACGGAACCAAGAATCCATGGGAGATATGGCAGGAGTTTCTAGAAGATTCTAACCGTAAAGCATTCTCCAGAGACAATAATGAGCTTTACTTGTTCACTGTTCTCAAAAAGAAAGGTCGCAGTAACGCACGGATCGATCGCCGGGTCGGTTTGGGGACATGGGCGGGCGaggattctgccaagcccgtatTCTGTGTGACCCGGGAAGGAAAACGAGTTCTGGGATCCAAGAGACGGTACCGTTTTGAGAAGAGAGGGTCTGAACATCATGGTGGCTGGATCATGATCGAATACTCCCTTGATGACTCTCTGTTGAAGCAAATATCAAACCCTAATAAGCACTTTGTTCTCTGCAAGATCAAGAAGAATGAACGGACTGCACGAGTGGGAACTGGAGAGAAGAAGCCATTGGAGCTGAGGGGTGTTGATGcagcaagagagaaaaagaatggtGATGAGAATAAGAAGGAAATTCTGGATTTGCTTAATGGCAGTTTTCCAGAATTGGTGATTAGCATGGATGAGGTTCTGGCATACTGGAATCATGACATCTCAGATTA 770 0.4442 MSSLVSSLPTNDPLAKTTPFEFKLCWDRSCAVGVGFSFQPKEEELIGVFLFNKVAGKDDVSTAIIPESDLYGTKNPWEIWQEFLEDSNRKAFSRDNNELYLFTVLKKKGRSNARIDRRVGLGTWAGEDSAKPVFCVTREGKRVLGSKRRYRFEKRGSEHHGGWIMIEYSLDDSLLKQISNPNKHFVLCKIKKNERTARVGTGEKKPLELRGVDAAREKKNGDENKKEILDLLNGSFPELVISMDEVLAYWNHDISD 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00322 256 Pfam No apical meristem (NAM) protein 34 170 IPR003441 GO:0003677|GO:0006355
Bva11g00322 256 ProSiteProfiles NAC domain profile. 32 193 IPR003441 GO:0003677|GO:0006355
Bva11g00322 256 SUPERFAMILY NAC domain 31 192 IPR036093 GO:0003677|GO:0006355
Bva11g00322 256 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 34 210 - -
Bva11g00322 256 Gene3D NAC domain 42 198 IPR036093 GO:0003677|GO:0006355
Bva11g00322 256 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 34 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00322 Bva-Chr11 7026523 7027293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00322 31 204 NAC Transcription Factor Family AT5G04410 31.461 4.06e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva11g00322 NAM 3.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00322 - - pvy:116139267 145.591