Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00321 ATGTCGTCGTCGGAATTGAATCAACCTCCCTTGAATGATCCACCGGTAGAGGAAACGGCGCCGTTTGAATCCAAAGAATGTGGAGAGAGTAGTCGCGCTGTTGCTTGCCCTGTGAGGTTAAGTTTCCAGCCAAGGGAAGATGAACTCATTGCATTTTATCTGTTTAACAAGGTTGCCGGGAATGATGACGTCGGCAAGGTGAGAATACCAGAATGTGACTTGTACGGAACCAAGAATCCATGGGAGATATTGCAAGAGTTTCTAGAAGATTCTAACTGCGAATCATTCTCCGAGGACAAGAATGAGCTTTACTTGTTCACTACcctaaaaaagaaaggcaCCAGCCCTTCACGCTTTGATCGTACGGTCGGTGTTGGGAGATGGAGAGGTGAGGGGTACTTGCAAACTGTATTGAGTATGACCCAGAGAGGAGAACGTGTTGCGGTGGGATCCAAGAAACGGTACCGTTTTGAGAAGAGAGGCTCTGAACATCATCATACCTGGATCATGGTGGAGTACTCACTTGCTAATTCTTTGCTGCAGCAAATACCAAACCCTAATTCGCACATTGTTCTCTGCATGATCAAGAAGAATGTACGAGTGGGTACTGGAGAGAACAAGCCATTGGAACTGAATGATGCTGATGCAGCAACAAAGCAAAGGAATGGTGATGGGAAAGATAATTG 686 0.4504 MSSSELNQPPLNDPPVEETAPFESKECGESSRAVACPVRLSFQPREDELIAFYLFNKVAGNDDVGKVRIPECDLYGTKNPWEILQEFLEDSNCESFSEDKNELYLFTTLKKKGTSPSRFDRTVGVGRWRGEGYLQTVLSMTQRGERVAVGSKKRYRFEKRGSEHHHTWIMVEYSLANSLLQQIPNPNSHIVLCMIKKNVRVGTGENKPLELNDADAATKQRNGDGKDN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00321 228 MobiDBLite consensus disorder prediction 1 25 - -
Bva11g00321 228 ProSiteProfiles NAC domain profile. 36 198 IPR003441 GO:0003677|GO:0006355
Bva11g00321 228 SUPERFAMILY NAC domain 34 197 IPR036093 GO:0003677|GO:0006355
Bva11g00321 228 MobiDBLite consensus disorder prediction 205 228 - -
Bva11g00321 228 Gene3D NAC domain 46 201 IPR036093 GO:0003677|GO:0006355
Bva11g00321 228 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 37 207 - -
Bva11g00321 228 MobiDBLite consensus disorder prediction 212 228 - -
Bva11g00321 228 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 37 207 - -
Bva11g00321 228 Pfam No apical meristem (NAM) protein 39 175 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00321 Bva-Chr11 7021119 7021805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00321 35 183 NAC Transcription Factor Family AT1G71930 30.323 5.38e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva11g00321 NAM 1.5e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00321 - - cic:CICLE_v10013879mg 122.864