Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00309 ATGGCTGAAGATTGTGTTGGAACCACTGTTGCAACCCCTTCTTCTACCCCATTAAACTGGTGGGATGTTCATGcaaattctctttcttcatggAGTAACCCTAACACCACATGGAACAACCAACCAGACCCtaattcttcatcttcttgtgAAGATGAGATATCGGTTTCTACGTCTTTCACTAATGCATCCAACCACTCTAGCCTCACCGTCGAGTCCTCTCGCAGGCTTGTTGAGCCTTCTCCTTCATCAAACGAGTTGATGGGAGAACATGCTTCCGATAATCAGCTGTGGAGTCATGTTTTATTAGGTGTTGGAGGCAATGGAGAGCTTCACAACAATCAAGTAGATGGTGAGAATTTCCTTGATGCACTATCATCTAAAAGCATGAGTAGTGCTATGTTTGAACCAGCCTGTGATTACTTGAAGAAACTAGATACCAGTTGGGAATACAATCACTCAACATCTTTCAATAACTTTGATGAGAAGCACTTGCATGGATTTAGTGAGGCTatgattgaaaatgaaagattgACAAAGTTATCCAATCTTGTAAACACTTGGTCTCTTGCAACACCAACCCAAGTCAATAGCCAGTTTGaaccacaaataaataataatatatctcTGAGTTCATTGGATCATTATTCACAAACTGATCCTTGCCTTATCAAGCCAGCTCTTGGAGGTTCGATATCGAGTGCTGTTGGAGAAGCAAATAGAAATTCTGGGATCTTTCCTTGCTATGGCCTTGACATGAAGATCAAGCAAGAATATCATCCAAGTGAAGTCCCTGGAGCTGATCAATTTGGGAGGTCATATAATAGCATGGGGTATCAGAAGGGACTGCATAGCCCTTCGGAGGGGGACAATGGTAAAATTTACTATGGAATGCCCAGTATTTCTTCTTACACAAGAAATTTCGCAGACGTTATATCGTTTAACAGTCGCCTTGGAAGGCCACTAATTGGGATCCATGGACATAAATCCAGCATGAAACCCATGAATTTATCCAAGCCTAGGAAGCAAGGTCCCCAGGCATCATCACCTACAAGAACTAATGGTGGAAGAGAGCAGGGAACAGCAGGagaagcaaagaagaaaagatctGAAGACTCTTCAGAAGCAATCCTAAAGAAGCCTAAGCAAGATTCATCCACAGCTTCACCAACAAAGGTGCAGGCACCCAAAGTCAAGCTAGGGGACAAGATCACAGCCCTTCAACAAATTGTATCGCCTTTTGGAAAGACAGATACAGCATCAGTGCTATTTGAAGCAATTGGTTACATTAAGTTTCTTCAAGAACAAGTCCAGCTACTAAGCAATCCGTACTTGAAAAATAACTCGCACAAGGACCTATGGGTAAGCTTGGACAGAAAAGACAAGGGAGATGGAAAGCTGGACCTTAGGAGCAGAGGACTTTGTTTAGTTCCAATTTCTTGCACACCTCAAATTTACAGAGAGAACACTGGACCAGATTATTGGACACCAGCATACAGAGGATGTTTATATAGGTG 1517 0.4015 MAEDCVGTTVATPSSTPLNWWDVHANSLSSWSNPNTTWNNQPDPNSSSSCEDEISVSTSFTNASNHSSLTVESSRRLVEPSPSSNELMGEHASDNQLWSHVLLGVGGNGELHNNQVDGENFLDALSSKSMSSAMFEPACDYLKKLDTSWEYNHSTSFNNFDEKHLHGFSEAMIENERLTKLSNLVNTWSLATPTQVNSQFEPQINNNISLSSLDHYSQTDPCLIKPALGGSISSAVGEANRNSGIFPCYGLDMKIKQEYHPSEVPGADQFGRSYNSMGYQKGLHSPSEGDNGKIYYGMPSISSYTRNFADVISFNSRLGRPLIGIHGHKSSMKPMNLSKPRKQGPQASSPTRTNGGREQGTAGEAKKKRSEDSSEAILKKPKQDSSTASPTKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKFLQEQVQLLSNPYLKNNSHKDLWVSLDRKDKGDGKLDLRSRGLCLVPISCTPQIYRENTGPDYWTPAYRGCLYR 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00309 505 MobiDBLite consensus disorder prediction 341 358 - -
Bva11g00309 505 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 32 491 - -
Bva11g00309 505 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 399 448 IPR036638 GO:0046983
Bva11g00309 505 MobiDBLite consensus disorder prediction 325 395 - -
Bva11g00309 505 PANTHER TRANSCRIPTION FACTOR BHLH111 32 491 - -
Bva11g00309 505 CDD bHLH_AtbHLH_like 399 441 IPR045239 -
Bva11g00309 505 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 384 433 IPR011598 GO:0046983
Bva11g00309 505 Gene3D - 397 453 IPR036638 GO:0046983
Bva11g00309 505 MobiDBLite consensus disorder prediction 34 90 - -
Bva11g00309 505 MobiDBLite consensus disorder prediction 361 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00309 Bva-Chr11 6859660 6863499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00309 1 505 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 33.837 2.58e-50 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00309 - - aprc:113873522 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00309 11 6859660 6863499 Bva11g00309 11 6859660 6863499 ECH