Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00308 ATGGCAAGGATCAAACCTCAAACTCTGCTACAACAAAGCAAAAGGAAGAAGGGGCCTGCTCGAATCAGTGCTACAACTGTTATATTTTATGGCTTGATTCTTGTCTTGATTGTGTTCTTCGTATTTGCTACTTACAGACATTGGTCCAATAGGTCAAGATTTCGATCAGAAAATCATTTGTCAGTCTCTGAGggtgaaaataattttgcgGACTCAAAGAAATCTGATGTACCTGGATATGCTGTTTTAAATACCTCTAAAGGTTCTATAGTAATAGAGCTTTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACCTATGTCAAAAGAAGCACTTCAAAGGGATGCTTTTTCACCGTGTTATTAAACACTATGTGATTCAGGCAGGGGATAACCAAGGAACAGATGCTACAGAAGATTGGAACTTGAGAGGAAAGCATTAtaaaagTGTGAAACATGAAGCATTTATGCTTGGAACTTCGAAGGGAAAGCACAGTAACAAAGGATTTGATCTATTCATTACAACTGCTCCAATACCAGATCTAAATGAGAAGCTTGCTGTGTTTGGCCGGGTCATAAAGGGAGAGGATGTTGTTCAGGAAATTGAGGAAGTGGATACAGATGAACATTACCAacccaaaatttctattggGATACTTGATGTGACACTCAGGCAGAAAGCCTG 692 0.3714 MARIKPQTLLQQSKRKKGPARISATTVIFYGLILVLIVFFVFATYRHWSNRSRFRSENHLSVSEGENNFADSKKSDVPGYAVLNTSKGSIVIELYKESAPEVVDEFIDLCQKKHFKGMLFHRVIKHYVIQAGDNQGTDATEDWNLRGKHYKSVKHEAFMLGTSKGKHSNKGFDLFITTAPIPDLNEKLAVFGRVIKGEDVVQEIEEVDTDEHYQPKISIGILDVTLRQKA 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00308 230 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP21-4 1 230 - -
Bva11g00308 230 Gene3D - 65 230 IPR029000 -
Bva11g00308 230 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 82 224 IPR002130 GO:0000413|GO:0003755
Bva11g00308 230 SUPERFAMILY Cyclophilin-like 77 226 IPR029000 -
Bva11g00308 230 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 88 226 IPR002130 GO:0000413|GO:0003755
Bva11g00308 230 CDD cyclophilin 82 223 - -
Bva11g00308 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 120 132 IPR002130 GO:0000413|GO:0003755
Bva11g00308 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 94 109 IPR002130 GO:0000413|GO:0003755
Bva11g00308 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 173 185 IPR002130 GO:0000413|GO:0003755
Bva11g00308 230 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 186 201 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00308 Bva-Chr11 6834183 6840988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00308 79 226 U-box Gene Family AT5G67530 30.323 1.59e-17 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00308 - - gmx:100781538 400.593