Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00306 ATGGAGTTTCTTTCTCTAGTTGTTGGCAAGTTATTGGACTACACTGTGGCACCAATTACAAAGCAGGTGGGCTACTTGATTTTTTACCACAGTAACGTTAAGGAGCTAAGGGAGGAAGCTGAAGCACTCCAGCGTGAAAGAGAACGTGTGCAACATGCAGTTGATACTGCCGTGAGGAATGGGGAACTAATTGAAGGAGATGTCAAGAAGTGGCTAGAAGAGGTGGATGAGATCAGTCTAGAGTTTGATGAGCTCAACAAGGATGAACGCCATGCAAACGCAGATTGTTCTACCAGACCCTTTCCAAACTTTTGCTTCAGGCATAAATTGAGCAGACGatcaaagaagatgaaggtgGTAATTGCAGAAACCATTGCGAGAAGAAACTTTGATCGAGTTTCTTATCGAGAAGTTCCAAAATTAACACGGCTTACTTCCTCGGAGTTCACCTTAAAGGAGTTCACGAAAGAACTAGGAGAAcctaaaattttctcaaaacttGGATCGAGGGTGTCAGAACAAAACGACATAATGAAAGCACTGGAAGATCCTATGGTACAGACAATTGGAGTACATGGTTTGCCTGGTGTGGGTAAGACCACTCTAGTAGAAGCTGTTGCTAAGAAGGCTCAAAAACACGGGCTTTTTGATGTGGTGGTCTTGTTAAAAGTCACACAGAATCCGGATCTCGAAAAGATTCAACTACAAATTGCTGACATGTTGGGGCTCAAATTTGAAGAGCAAAGCTTAATTGGAAGAGCATGTCGATTACGTCATAGATTAAATCTGAATCATGAAAGAATTCTTATAATCTTGGATGATATTTGGCGAGAGCTCAATATGGATGAGATTGGAATCCCTTGTGTGCACGAGGGCTTGAAAATCTTAATGACTTCTAGAAGTCAAGGGATATTATCTGACAAAATGAATACTCATGTCAACTTCTTGTTACAAGTTCTTCCATGGGTAGAAGCTTGGAAGCTATTTATGGATAAGGCCCAATTTGATGAATCTGCTGTAAGTGGTGAATTTTTATCGATAGCCACTCAGGTTGTTAAAGAATGTGCGGGCTTGCCAATGGCCATTGTGATTGTTGCAACTGCACTAAAAAACAAGAGTTTGTTCGAGTGGAAGGACACCTTGAGACAACTACAAAGTCCTACTCTAACAAATATTACAGGTGAGCAGAATCAAATATACAATGCTATTAAGGTGAGTTATGATAGGTTGGAAAATGAGCTCTtgaagtcaatttttttactctttggAGTGATGCAATCAAATTCTTTGATTACAGATTTGTTCAATGTCTCTGTTGGCCTTGGTTTGTTTAAAGACATCTATAACTTGGAAGAGGCTTG 1361 0.3872 MEFLSLVVGKLLDYTVAPITKQVGYLIFYHSNVKELREEAEALQRERERVQHAVDTAVRNGELIEGDVKKWLEEVDEISLEFDELNKDERHANADCSTRPFPNFCFRHKLSRRSKKMKVVIAETIARRNFDRVSYREVPKLTRLTSSEFTLKEFTKELGEPKIFSKLGSRVSEQNDIMKALEDPMVQTIGVHGLPGVGKTTLVEAVAKKAQKHGLFDVVVLLKVTQNPDLEKIQLQIADMLGLKFEEQSLIGRACRLRHRLNLNHERILIILDDIWRELNMDEIGIPCVHEGLKILMTSRSQGILSDKMNTHVNFLLQVLPWVEAWKLFMDKAQFDESAVSGEFLSIATQVVKECAGLPMAIVIVATALKNKSLFEWKDTLRQLQSPTLTNITGEQNQIYNAIKVSYDRLENELLKSIFLLFGVMQSNSLITDLFNVSVGLGLFKDIYNLEEA 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00306 453 SMART AAA_5 185 320 IPR003593 -
Bva11g00306 453 PRINTS Disease resistance protein signature 188 203 - -
Bva11g00306 453 PRINTS Disease resistance protein signature 262 276 - -
Bva11g00306 453 PRINTS Disease resistance protein signature 355 369 - -
Bva11g00306 453 Gene3D - 322 410 IPR042197 -
Bva11g00306 453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 421 IPR027417 -
Bva11g00306 453 Coils Coil 68 88 - -
Bva11g00306 453 Gene3D - 148 315 IPR027417 -
Bva11g00306 453 Pfam NB-ARC domain 177 408 IPR002182 GO:0043531
Bva11g00306 453 Coils Coil 26 60 - -
Bva11g00306 453 PANTHER - 7 453 - -
Bva11g00306 453 PANTHER PHOSPHATASE, PUTATIVE-RELATED 7 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00306 Bva-Chr11 6819454 6820815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00306 186 447 WRKY Transcription Factor Family AT5G45050 25.468 8.11e-08 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00306 - - gab:108488239 343.969